prot_M-pyrifera_M_contig66.16025.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig66.16025.1
Unique Nameprot_M-pyrifera_M_contig66.16025.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length230
Homology
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BLAST of mRNA_M-pyrifera_M_contig66.16025.1 vs. uniprot
Match: A0A6C0HXP8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HXP8_9ZZZZ)

HSP 1 Score: 63.2 bits (152), Expect = 5.900e-8
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0 
Query:    3 LCSHDSCPRRRTFNVEGKLAAYCKQHAKDGMVDVRSRRCLYNSCTKHPNFNVIGK 57
            +C H  C  R  +N EG+   YC  H ++GMVDV+S RC++  C K PNFN  G+
Sbjct:    1 MCIHPGCKTRSIYNKEGERPMYCGIHRQEGMVDVKSNRCIHECCRKIPNFNKEGE 55
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66.16025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6C0HXP8_9ZZZZ5.900e-845.45Uncharacterized protein n=1 Tax=viral metagenome T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66contigM-pyrifera_M_contig66:1780..2469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66.16025.1mRNA_M-pyrifera_M_contig66.16025.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig66 1780..2469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig66.16025.1 ID=prot_M-pyrifera_M_contig66.16025.1|Name=mRNA_M-pyrifera_M_contig66.16025.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp
MGLCSHDSCPRRRTFNVEGKLAAYCKQHAKDGMVDVRSRRCLYNSCTKHP
NFNVIGKKMPAYCRQHAEDGMMDVRHMCLHHACAKRPTFNFEGSKSAVCC
KQHAQKGMINVLNRRCSHDSCSNLPTFIDERRKSATYCSQHAESGMVDVR
GKRCARKFCTRQPTYDVQGSKSAIFCKQHAEKGMVNVSSRRCGIDSCTTK
PIFNVEGSKTAAYCKKHAADGMVDVFNTRC
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