prot_M-pyrifera_M_contig6567.15957.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6567.15957.1
Unique Nameprot_M-pyrifera_M_contig6567.15957.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: D7FHU3_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU3_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 5.790e-58
Identity = 96/142 (67.61%), Postives = 112/142 (78.87%), Query Frame = 0
Query:   35 AEAEIMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVARAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSKVNIEDIEALFAELGKAIYVKICKVGGRKL 176
            AE   +KMLEFYFG SNF WDRFMQ KAGKMGE L+D+S+L+TFNKLK +VK+A L   +  A++AR  EASPSLRVSEDKKQIGR   MTEE   ER+ARTVQTKGY K+S + IED+E LF++ GKA YVKICK GG KL
Sbjct:   52 AETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGGNKL 193          
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: A0A6H5JNF3_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF3_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 2.200e-19
Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0
Query:   34 DAEAEIMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMV 99
            +AE   +KMLEFYFG SNF WDRFMQ KAGKMGE L+D+S+L+TFNKLK +VK+A L   +A A+V
Sbjct:  224 EAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGEKLMDISVLMTFNKLKNIVKKADLSPEEAQALV 289          
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: A0A7S0BRU6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BRU6_9RHOD)

HSP 1 Score: 69.7 bits (169), Expect = 1.080e-11
Identity = 43/139 (30.94%), Postives = 79/139 (56.83%), Query Frame = 0
Query:   32 KEDAEAEIMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVARAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSKVNIEDIEALFAELGKAIYVKICK 170
            K + E ++ + +E+YF   N   D+F++GK      G +D+SI+++FN++  L  +  ++D       A+A E+S  L++SED++++ R  P+ E    E   R V   G+S D+  +I+D+  +F   GK + VK+ K
Sbjct:    4 KSELEDKVRRQVEYYFSDVNLPKDKFLKGKVSDDPNGYVDLSIIISFNRMDQL--KVSVED------TAKALESSEILQLSEDRQRVKRSTPLVELGRFEE--RAVYVSGFSSDASPDIDDVRKVFEAFGKVLSVKLRK 132          
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: A0A835Z2D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D4_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 5.080e-11
Identity = 51/140 (36.43%), Postives = 82/140 (58.57%), Query Frame = 0
Query:   37 AEIMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVARAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSK-VNIEDIEALFAELGKAIYVKICKVGGRK 175
            A++ + LEFYFG SNF+ D+F++ +     + L+ +++L+TFNKLK++        AD +A+V  AA+ S  L VSED  ++GR +  TE   D R  RT+  KG+  D   ++IE +  +F   G+  YV I +   +K
Sbjct:   93 AKVQRQLEFYFGDSNFNRDKFLREQVKLSEDSLVPLTVLMTFNKLKSMT-------AD-EAVVLAAAKQSEVLSVSEDGLRVGRGDGATELRYDAR-PRTIYAKGFGYDCPDLSIEFVTDMFKVFGEVGYVYIRRTMDKK 223          
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: A0A452EJL2_CAPHI (La-related protein 7 n=1 Tax=Capra hircus TaxID=9925 RepID=A0A452EJL2_CAPHI)

HSP 1 Score: 68.6 bits (166), Expect = 2.470e-10
Identity = 49/143 (34.27%), Postives = 81/143 (56.64%), Query Frame = 0
Query:   26 EEAPISKEDAEAEIMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVARAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSKVNIEDIEALFAELGKAIYVKI 168
            EE+   K++  A+IMK ++F+FG +N   DRF+Q +  K  +G +D+S+L++FNK+K L    +L        +ARA ++S  + +  +  +I RK+P+ E   DE   RTV  +   KD  VN   IE +F +    +Y+ I
Sbjct:   13 EESIEKKKEVLADIMKQVDFWFGDANLHKDRFLQEQIEKSRDGYVDISLLVSFNKMKKLTTDGKL--------IARALKSSAVVELDLEGTRIRRKKPLGERPKDED-ERTVYVELLPKD--VNHSWIERVFGKCSNVVYISI 144          
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: UPI000644C30E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C30E)

HSP 1 Score: 68.2 bits (165), Expect = 2.840e-10
Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 0
Query:   39 IMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVARAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSKVNIEDIEALFAELGKAIYVKICK 170
            I+K +E+YF  SN   D+F++G+  K   G +++ I+ +FNK+KTL    QL        V+ A ++S  L VSED K + R +P+ + E   +  +T+ +KG+  D+   IE ++A F   G  + V++ K
Sbjct:   35 IVKQVEYYFSDSNLPADKFLKGEVAKNPNGFVNIDIIASFNKMKTLTLDLQL--------VSDALKSSKKLEVSEDGKTVRRVDPLPDTELINK--KTLYSKGWPLDT-TTIETVQAFFKPYGNVLSVRLRK 155          
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: Q1RMJ4_BOVIN (La-related protein 7 (Fragment) n=2 Tax=Bovidae TaxID=9895 RepID=Q1RMJ4_BOVIN)

HSP 1 Score: 64.3 bits (155), Expect = 2.270e-9
Identity = 44/132 (33.33%), Postives = 76/132 (57.58%), Query Frame = 0
Query:   37 AEIMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVARAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSKVNIEDIEALFAELGKAIYVKI 168
            A+I+K ++F+FG +N   DRF++ +  K  +G +D+S+L++FNK+K L    +L        +ARA ++S  + +  +  +I RK+P+ E   DE   RTV  +   K+  VN   IE +F + G  +Y+ I
Sbjct:   34 ADIVKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKL--------IARALKSSAVVELDLEGTRIRRKKPLGERPKDED-ERTVYVELLPKN--VNHSWIERVFGKCGNVVYISI 154          
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: A0A452EJ43_CAPHI (La-related protein 7 n=2 Tax=Capra hircus TaxID=9925 RepID=A0A452EJ43_CAPHI)

HSP 1 Score: 65.5 bits (158), Expect = 2.870e-9
Identity = 45/131 (34.35%), Postives = 74/131 (56.49%), Query Frame = 0
Query:   38 EIMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVARAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSKVNIEDIEALFAELGKAIYVKI 168
            +IMK ++F+FG +N   DRF+Q +  K  +G +D+S+L++FNK+K L    +L        +ARA ++S  + +  +  +I RK+P+ E   DE   RTV  +   KD  VN   IE +F +    +Y+ I
Sbjct:   27 DIMKQVDFWFGDANLHKDRFLQEQIEKSRDGYVDISLLVSFNKMKKLTTDGKL--------IARALKSSAVVELDLEGTRIRRKKPLGERPKDED-ERTVYVELLPKD--VNHSWIERVFGKCSNVVYISI 146          
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: G1SSB3_RABIT (La-related protein 7 n=3 Tax=Oryctolagus cuniculus TaxID=9986 RepID=G1SSB3_RABIT)

HSP 1 Score: 65.1 bits (157), Expect = 4.030e-9
Identity = 46/132 (34.85%), Postives = 75/132 (56.82%), Query Frame = 0
Query:   37 AEIMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVARAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSKVNIEDIEALFAELGKAIYVKI 168
            A+I K ++F+FG +N   DRF++ +  K  +G +D+S+LL+FNK+K L    +L        +ARA ++S  + +  +  +I RK+P+ E   DE   RTV  +   K+  VN   IE +F + G  +YV I
Sbjct:   35 ADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLLSFNKMKKLTTDGKL--------IARALKSSAIVELDLEGTRIRRKKPLGERPKDED-ERTVYVELLPKN--VNHSWIERVFGKCGNVVYVSI 155          
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Match: A0A813CCZ0_9DINO (La protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CCZ0_9DINO)

HSP 1 Score: 64.3 bits (155), Expect = 6.240e-9
Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   37 AEIMKMLEFYFGGSNFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVARAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSKVN 149
            A I K +E+YF  +NF  D+ ++G A    +G +DVS LLTFN+LK L        +   A+VA A E S  +++S DKK++ R +P+    SD+   RTV  KG+  D+K++
Sbjct:    9 AAIKKQVEYYFNDANFRRDKHLRGIADADPQGYVDVSALLTFNRLKAL--------SSDPAVVAAALEDSDIVQLSADKKKLRRTKPLPL--SDDSADRTVYMKGFPVDAKLD 111          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6567.15957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHU3_ECTSI5.790e-5867.61HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5JNF3_9PHAE2.200e-1965.15HTH La-type RNA-binding domain-containing protein ... [more]
A0A7S0BRU6_9RHOD1.080e-1130.94Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A835Z2D4_9STRA5.080e-1136.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A452EJL2_CAPHI2.470e-1034.27La-related protein 7 n=1 Tax=Capra hircus TaxID=99... [more]
UPI000644C30E2.840e-1033.33hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
Q1RMJ4_BOVIN2.270e-933.33La-related protein 7 (Fragment) n=2 Tax=Bovidae Ta... [more]
A0A452EJ43_CAPHI2.870e-934.35La-related protein 7 n=2 Tax=Capra hircus TaxID=99... [more]
G1SSB3_RABIT4.030e-934.85La-related protein 7 n=3 Tax=Oryctolagus cuniculus... [more]
A0A813CCZ0_9DINO6.240e-938.94La protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2309... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002344Lupus La proteinPRINTSPR00302LUPUSLAcoord: 42..59
score: 41.92
coord: 68..83
score: 30.11
coord: 129..145
score: 28.34
IPR006630La-type HTH domainSMARTSM00715lacoord: 33..121
e-value: 3.9E-8
score: 42.3
IPR006630La-type HTH domainPFAMPF05383Lacoord: 39..91
e-value: 5.9E-10
score: 39.1
IPR006630La-type HTH domainPROSITEPS50961HTH_LAcoord: 29..128
score: 18.241
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 31..129
e-value: 9.2E-20
score: 72.3
NoneNo IPR availablePANTHERPTHR22792:SF115LA-RELATED PROTEIN 7coord: 7..170
NoneNo IPR availablePANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 7..170
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 31..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6567contigM-pyrifera_M_contig6567:4308..7266 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6567.15957.1mRNA_M-pyrifera_M_contig6567.15957.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6567 4308..7266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6567.15957.1 ID=prot_M-pyrifera_M_contig6567.15957.1|Name=mRNA_M-pyrifera_M_contig6567.15957.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
EAESKPDEDKKEETKEAKPVAVEKKEEAPISKEDAEAEIMKMLEFYFGGS
NFSWDRFMQGKAGKMGEGLIDVSILLTFNKLKTLVKRAQLDDADADAMVA
RAAEASPSLRVSEDKKQIGRKEPMTEEESDERLARTVQTKGYSKDSKVNI
EDIEALFAELGKAIYVKICKVGGRKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002344Lupus_La
IPR006630La_HTH
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf