prot_M-pyrifera_M_contig65433.15913.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65433.15913.1
Unique Nameprot_M-pyrifera_M_contig65433.15913.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length67
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig65433.15913.1 vs. uniprot
Match: A0A6H5L474_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L474_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.560e-32
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0 
Query:    1 LFDNAGKARYQEESSSTATHEGFTMCSLFFAPYEVSNVADTINIAGLKGEDIPPVFHRLDQFQVT 65
            LFDNAGKARYQEESSST+  EGFTMCSLFFAPYEVSNVADTINIAGLKGE++PP+FHRLD FQ+T
Sbjct:  214 LFDNAGKARYQEESSSTSNREGFTMCSLFFAPYEVSNVADTINIAGLKGEEVPPIFHRLDLFQLT 278
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65433.15913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L474_9PHAE1.560e-3287.69J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65433contigM-pyrifera_M_contig65433:70..1179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65433.15913.1mRNA_M-pyrifera_M_contig65433.15913.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65433 70..1179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65433.15913.1 ID=prot_M-pyrifera_M_contig65433.15913.1|Name=mRNA_M-pyrifera_M_contig65433.15913.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
LFDNAGKARYQEESSSTATHEGFTMCSLFFAPYEVSNVADTINIAGLKGE
DIPPVFHRLDQFQVTR*
back to top