prot_M-pyrifera_M_contig65348.15896.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65348.15896.1
Unique Nameprot_M-pyrifera_M_contig65348.15896.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length40
Homology
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: A0A6H5K703_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K703_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.940e-13
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 DGRGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            +  GYNIGVRLIDEFLAKSQV+TP  CTDLKETADV+AKV
Sbjct:   53 ESMGYNIGVRLIDEFLAKSQVSTP--CTDLKETADVVAKV 90          
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: D8LQV4_ECTSI (Trafficking protein particle complex subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV4_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.150e-11
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 DGRGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            +  GYNIGVRLIDEFLAK+ V+TP  CTDLKETADV+AKV
Sbjct:   53 ESMGYNIGVRLIDEFLAKAGVSTP--CTDLKETADVVAKV 90          
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: A0A427A405_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427A405_ENSVE)

HSP 1 Score: 58.5 bits (140), Expect = 3.370e-10
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    3 RGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            RGYNIGVRL+DEFLAKS V+    C D KETADVIAKV
Sbjct:   11 RGYNIGVRLVDEFLAKSNVSR---CVDFKETADVIAKV 45          
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: UPI000D189103 (trafficking protein particle complex subunit 3 isoform X2 n=1 Tax=Populus trichocarpa TaxID=3694 RepID=UPI000D189103)

HSP 1 Score: 58.9 bits (141), Expect = 1.160e-9
Identity = 30/38 (78.95%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    3 RGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            RGYNIGVRLIDEFLAKS V+    C D KETADVIAKV
Sbjct:   30 RGYNIGVRLIDEFLAKSNVSR---CVDFKETADVIAKV 64          
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: UPI001929A7CF (trafficking protein particle complex subunit 3-like isoform X2 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929A7CF)

HSP 1 Score: 58.2 bits (139), Expect = 1.830e-9
Identity = 30/40 (75.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 DGRGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            D  GYNIGVRLIDEFLAKS V+    C D KETADVIAKV
Sbjct:   50 DQMGYNIGVRLIDEFLAKSNVSR---CADFKETADVIAKV 86          
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: A0A392M4V2_9FABA (Trafficking protein particle complex subunit 3-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M4V2_9FABA)

HSP 1 Score: 55.5 bits (132), Expect = 1.850e-9
Identity = 27/37 (72.97%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    4 GYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            GYNIG+RLIDEFLAKS V+    C D +ETADVIAKV
Sbjct:    1 GYNIGIRLIDEFLAKSNVSR---CVDFRETADVIAKV 34          
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: UPI001C4D7233 (trafficking protein particle complex subunit 3-like isoform X2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4D7233)

HSP 1 Score: 58.2 bits (139), Expect = 1.930e-9
Identity = 30/40 (75.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 DGRGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            D  GYNIGVRLIDEFLAKS V+    C D KETADVIAKV
Sbjct:   50 DQMGYNIGVRLIDEFLAKSNVSR---CVDFKETADVIAKV 86          
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: UPI0007F028C2 (trafficking protein particle complex subunit 3-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F028C2)

HSP 1 Score: 58.2 bits (139), Expect = 2.410e-9
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 DGRGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            D  GYNIG+RLIDEFLAKS ++T   C D KETA+VIAKV
Sbjct:   49 DQMGYNIGIRLIDEFLAKSNIST---CVDFKETAEVIAKV 85          
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: A0A2G5CRZ1_AQUCA (Trafficking protein particle complex subunit n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A2G5CRZ1_AQUCA)

HSP 1 Score: 57.8 bits (138), Expect = 2.490e-9
Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 DGRGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            D  GYNIG+RLIDEFLAKS V+    C D KETADVIAKV
Sbjct:   50 DQMGYNIGIRLIDEFLAKSNVSR---CVDFKETADVIAKV 86          
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Match: UPI0007AF6CB1 (trafficking protein particle complex subunit 3-like n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI0007AF6CB1)

HSP 1 Score: 56.2 bits (134), Expect = 2.680e-9
Identity = 28/40 (70.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 DGRGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV 40
            D  GYNIGVRLIDEFLAKS ++    C D KETA+VIAKV
Sbjct:   50 DQMGYNIGVRLIDEFLAKSNISR---CVDFKETAEVIAKV 86          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65348.15896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K703_9PHAE2.940e-1382.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQV4_ECTSI2.150e-1177.50Trafficking protein particle complex subunit n=1 T... [more]
A0A427A405_ENSVE3.370e-1076.32Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
UPI000D1891031.160e-978.95trafficking protein particle complex subunit 3 iso... [more]
UPI001929A7CF1.830e-975.00trafficking protein particle complex subunit 3-lik... [more]
A0A392M4V2_9FABA1.850e-972.97Trafficking protein particle complex subunit 3-lik... [more]
UPI001C4D72331.930e-975.00trafficking protein particle complex subunit 3-lik... [more]
UPI0007F028C22.410e-970.00trafficking protein particle complex subunit 3-lik... [more]
A0A2G5CRZ1_AQUCA2.490e-972.50Trafficking protein particle complex subunit n=2 T... [more]
UPI0007AF6CB12.680e-970.00trafficking protein particle complex subunit 3-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1380.20coord: 1..40
e-value: 6.7E-11
score: 43.6
IPR016721Bet3 familyPANTHERPTHR13048TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3coord: 4..40
IPR024096NO signalling/Golgi transport ligand-binding domain superfamilySUPERFAMILY111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 2..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65348contigM-pyrifera_M_contig65348:149..268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65348.15896.1mRNA_M-pyrifera_M_contig65348.15896.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65348 149..268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65348.15896.1 ID=prot_M-pyrifera_M_contig65348.15896.1|Name=mRNA_M-pyrifera_M_contig65348.15896.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=40bp
DGRGYNIGVRLIDEFLAKSQVATPGGCTDLKETADVIAKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016721Bet3
IPR024096NO_sig/Golgi_transp_ligand-bd