prot_M-pyrifera_M_contig65327.15889.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65327.15889.1
Unique Nameprot_M-pyrifera_M_contig65327.15889.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length227
Homology
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BLAST of mRNA_M-pyrifera_M_contig65327.15889.1 vs. uniprot
Match: A0A3D4UGS9_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UGS9_9BACT)

HSP 1 Score: 110 bits (276), Expect = 1.790e-25
Identity = 76/229 (33.19%), Postives = 110/229 (48.03%), Query Frame = 0 
Query:    1 MLNVVLITPDYVEANTPTGVYTASLARSLSRRGHRVRVICKENIHYDPHFETRESATIHRISLRKDATQGSFALQASRCVLDLSRAGMCDVIECIDAPSCVLAIAAMRRVGAMDASLHSICIDPVSKHTDLISFSIESGVWRAPTSDAPLFVACDARDEASREFVIDGFKASDAPELGWSLALLDESGRWSILEDQSKENCGTPARS--VLVTTTRSAPILPTATWTQG 227
            ML+V LITP + E  +  G YT +LA  L   G    VIC  +    P         +HR+ +RK      FA Q ++ V +L  +  C +  CIDAP C   + A      +   + +    P S+ +DL    I  G+W  P    P  +   A + ASRE +I  ++AS AP LGWSLALL++ G W+I +  + E    P R   +L+T     P+LPT   + G
Sbjct:    1 MLSVALITPRFSETGSSAGYYTHALASLLCDAGIACDVICARSSAPRPGHLESGLLRVHRLPVRKGLPAMGFAAQCAKRVHELQLSNRCQLAICIDAPICADLLRAFPST--LCRVIQTRVEAPSSEPSDLRCLPIAEGIWSPPAFHTPTLLGIGASEGASREQLIRAYRASTAPVLGWSLALLEDDGTWAICDQLATE----PDRDDQILLTLQPGIPMLPTLASSNG 223
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65327.15889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3D4UGS9_9BACT1.790e-2533.19Uncharacterized protein n=2 Tax=Phycisphaerae TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028098Glycosyltransferase subfamily 4-like, N-terminal domainPFAMPF13579Glyco_trans_4_4coord: 19..110
e-value: 1.8E-7
score: 31.8
NoneNo IPR availableGENE3D3.40.50.2000coord: 2..169
e-value: 2.1E-8
score: 35.8
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 3..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65327contigM-pyrifera_M_contig65327:178..921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65327.15889.1mRNA_M-pyrifera_M_contig65327.15889.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65327 178..1334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65327.15889.1 ID=prot_M-pyrifera_M_contig65327.15889.1|Name=mRNA_M-pyrifera_M_contig65327.15889.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=227bp
MLNVVLITPDYVEANTPTGVYTASLARSLSRRGHRVRVICKENIHYDPHF
ETRESATIHRISLRKDATQGSFALQASRCVLDLSRAGMCDVIECIDAPSC
VLAIAAMRRVGAMDASLHSICIDPVSKHTDLISFSIESGVWRAPTSDAPL
FVACDARDEASREFVIDGFKASDAPELGWSLALLDESGRWSILEDQSKEN
CGTPARSVLVTTTRSAPILPTATWTQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028098Glyco_trans_4-like_N