prot_M-pyrifera_M_contig65221.15869.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65221.15869.1
Unique Nameprot_M-pyrifera_M_contig65221.15869.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length110
Homology
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 2.090e-57
Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAE 98
            +QVN LKITPDKQYLAAAGNPHVRLFEINSQ +SA+ SYDGH TNVTDVGFQKD KWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAV TVALHPNQAE
Sbjct:   34 SQVNSLKITPDKQYLAAAGNPHVRLFEINSQTASALRSYDGHATNVTDVGFQKDAKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVTTVALHPNQAE 131          
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.350e-55
Identity = 84/101 (83.17%), Postives = 93/101 (92.08%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELIS 101
            +QVNCL+ITPDKQ+LAAAGNPHVRLFEI SQN + VV+YDGHTTNVTDVGFQKDGKWM+TGSEDG+IKIWDLRAP CQRNY+  + VN VALHPNQAELIS
Sbjct:   34 SQVNCLRITPDKQFLAAAGNPHVRLFEIASQNPNPVVAYDGHTTNVTDVGFQKDGKWMFTGSEDGSIKIWDLRAPGCQRNYEAKAPVNAVALHPNQAELIS 134          
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: A0A8K1C2K7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2K7_PYTOL)

HSP 1 Score: 179 bits (454), Expect = 6.690e-54
Identity = 78/110 (70.91%), Postives = 96/110 (87.27%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELISGDMDGKVKV 110
            +QVNCL+ITPDK+Y+AAAGNPH+RLFEINS N + + SYDGHT+NVT +GFQK GKWMY+ S+DG IKIWDLRAP CQRNYD+G+ +N+V LHPNQAEL+ GD +G V+V
Sbjct:   34 SQVNCLQITPDKKYIAAAGNPHIRLFEINSNNPNHITSYDGHTSNVTSLGFQKHGKWMYSCSDDGTIKIWDLRAPGCQRNYDLGAPLNSVVLHPNQAELVVGDQNGCVRV 143          
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: I3SKI9_MEDTR (Uncharacterized protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=I3SKI9_MEDTR)

HSP 1 Score: 169 bits (427), Expect = 1.770e-51
Identity = 75/108 (69.44%), Postives = 90/108 (83.33%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELISGDMDGKV 108
            +QVN L+ITPDK+YLAAAGNPH+RLF++NS +   V+SYDGHT+NV  VGFQ DG WMY+GSEDG +KIWDLRAP CQR Y+  +AVNTV LHPNQ ELISGD +G +
Sbjct:   51 SQVNRLEITPDKRYLAAAGNPHIRLFDVNSNSPQPVMSYDGHTSNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRAAVNTVVLHPNQTELISGDQNGNI 158          
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: A0A2D4BTR3_PYTIN (Target of rapamycin complex subunit LST8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTR3_PYTIN)

HSP 1 Score: 170 bits (431), Expect = 1.800e-50
Identity = 75/110 (68.18%), Postives = 93/110 (84.55%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELISGDMDGKVKV 110
            +QVNCL+ITPDK+++AAAGNPH+RLFEINS N + V SYDGH+ NV  +GFQ+ GKWMY+ SEDG +KIWDLRAP+CQRNYD G  +N+V LHPNQAELI GD +G V++
Sbjct:   34 SQVNCLQITPDKKHIAAAGNPHIRLFEINSNNPNHVFSYDGHSGNVMSLGFQRHGKWMYSCSEDGTLKIWDLRAPNCQRNYDCGVPLNSVVLHPNQAELIVGDQNGGVRI 143          
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: A0A7S4M4A9_9EUKA (Target of rapamycin complex subunit LST8 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M4A9_9EUKA)

HSP 1 Score: 170 bits (431), Expect = 1.900e-50
Identity = 74/109 (67.89%), Postives = 92/109 (84.40%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELISGDMDGKVK 109
            +QVNCL+ITPDKQ +AA GNP+VRL+E+ + NSS   S+DGHT NVT +GF+K+GKWMYTGSEDG IKIWDLRAP CQR +D G+AVN+VALHPNQ +LISG  +G ++
Sbjct:   37 SQVNCLRITPDKQSIAAGGNPNVRLYEVATNNSSPTTSFDGHTGNVTSLGFEKEGKWMYTGSEDGTIKIWDLRAPGCQRKFDCGAAVNSVALHPNQTQLISGQQNGTIR 145          
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: D0NME7_PHYIT (Target of rapamycin complex subunit LST8 n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0NME7_PHYIT)

HSP 1 Score: 171 bits (432), Expect = 4.450e-50
Identity = 74/110 (67.27%), Postives = 94/110 (85.45%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELISGDMDGKVKV 110
            +QVNCL+ITPDK+Y+AAAGNPH+RLFEINS N + V SYDGH++NVT +GFQ+ GKWMY+ S+DG++KIWDLRAP CQR+Y  G  +N+V LHPNQAEL+ GD +G V+V
Sbjct:   34 SQVNCLQITPDKKYIAAAGNPHIRLFEINSNNPNHVTSYDGHSSNVTSLGFQRHGKWMYSCSDDGSVKIWDLRAPGCQRSYAAGVPLNSVVLHPNQAELLVGDQNGAVRV 143          
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: A0A6G0XEV7_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEV7_9STRA)

HSP 1 Score: 169 bits (428), Expect = 5.980e-50
Identity = 76/103 (73.79%), Postives = 87/103 (84.47%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELISGD 103
            +QVNCL++TPDK+Y+ AAGNPHVRLFEINS N + V SYDGHT NVT +GFQK GKWM+TGSEDG IKIWDLRA  CQRNY+  + VN+V LHPNQAELIS D
Sbjct:   34 SQVNCLQVTPDKKYIVAAGNPHVRLFEINSNNPNPVRSYDGHTGNVTSMGFQKHGKWMFTGSEDGTIKIWDLRAQGCQRNYECSAPVNSVTLHPNQAELISAD 136          
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: A0A662XRD3_9STRA (Target of rapamycin complex subunit LST8 n=5 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XRD3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.610e-49
Identity = 75/110 (68.18%), Postives = 92/110 (83.64%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELISGDMDGKVKV 110
            +QVNCL+ITPDK+Y+AAAGNPH+RLFEINS N + V SYDGH +NVT +GFQ+ GKWMY+ S+D  IKIWDLRAP CQR+YD G  +N+V LHPNQAEL+ GD +G V+V
Sbjct:   60 SQVNCLQITPDKKYIAAAGNPHIRLFEINSNNPNHVTSYDGHASNVTSLGFQRHGKWMYSCSDDNTIKIWDLRAPGCQRSYDAGVPLNSVVLHPNQAELLVGDQNGCVRV 169          
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Match: A0A5D6YF95_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YF95_9STRA)

HSP 1 Score: 167 bits (422), Expect = 4.300e-49
Identity = 73/110 (66.36%), Postives = 91/110 (82.73%), Query Frame = 0
Query:    1 AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVGFQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELISGDMDGKVKV 110
            +QVNCL+I PDK+++AAAG+PH+RLFEINS N + V S+DGHT NVT VGFQ+  KW+Y+ S+DG +KIWDLRAP CQRNYD G  +N VALHPNQAEL+ GD +G V+V
Sbjct:   34 SQVNCLQIAPDKRFIAAAGHPHIRLFEINSNNPNHVTSFDGHTGNVTGVGFQRHSKWIYSCSDDGTVKIWDLRAPGCQRNYDAGVPLNAVALHPNQAELLVGDQNGAVRV 143          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65221.15869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL41_ECTSI2.090e-5790.82WD40 repeat containing protein n=1 Tax=Ectocarpus ... [more]
A0A836C989_9STRA1.350e-5583.17WD40 repeat-containing protein n=1 Tax=Tribonema m... [more]
A0A8K1C2K7_PYTOL6.690e-5470.91Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
I3SKI9_MEDTR1.770e-5169.44Uncharacterized protein n=1 Tax=Medicago truncatul... [more]
A0A2D4BTR3_PYTIN1.800e-5068.18Target of rapamycin complex subunit LST8 n=1 Tax=P... [more]
A0A7S4M4A9_9EUKA1.900e-5067.89Target of rapamycin complex subunit LST8 n=1 Tax=V... [more]
D0NME7_PHYIT4.450e-5067.27Target of rapamycin complex subunit LST8 n=20 Tax=... [more]
A0A6G0XEV7_9STRA5.980e-5073.79Target of rapamycin complex subunit LST8 n=1 Tax=A... [more]
A0A662XRD3_9STRA1.610e-4968.18Target of rapamycin complex subunit LST8 n=5 Tax=P... [more]
A0A5D6YF95_9STRA4.300e-4966.36Target of rapamycin complex subunit LST8 n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 32..71
e-value: 1.0E-7
score: 41.6
coord: 74..110
e-value: 170.0
score: 2.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 37..71
e-value: 3.4E-9
score: 37.2
coord: 3..26
e-value: 0.012
score: 16.5
coord: 77..110
e-value: 0.0094
score: 16.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 39..80
score: 16.156
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..110
e-value: 2.5E-36
score: 127.1
NoneNo IPR availablePANTHERPTHR19842:SF0TARGET OF RAPAMYCIN COMPLEX SUBUNIT LST8coord: 2..110
NoneNo IPR availableSUPERFAMILY117289Nucleoporin domaincoord: 2..110
IPR037588Target of rapamycin complex subunit LST8PANTHERPTHR19842G BETA-LIKE PROTEIN GBLcoord: 2..110
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 58..72
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..110
score: 16.77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65221contigM-pyrifera_M_contig65221:112..869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65221.15869.1mRNA_M-pyrifera_M_contig65221.15869.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65221 112..869 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65221.15869.1 ID=prot_M-pyrifera_M_contig65221.15869.1|Name=mRNA_M-pyrifera_M_contig65221.15869.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
AQVNCLKITPDKQYLAAAGNPHVRLFEINSQNSSAVVSYDGHTTNVTDVG
FQKDGKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVNTVALHPNQAELI
SGDMDGKVKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037588MLST8
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom