prot_M-pyrifera_M_contig65112.15855.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65112.15855.1
Unique Nameprot_M-pyrifera_M_contig65112.15855.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length84
Homology
BLAST of mRNA_M-pyrifera_M_contig65112.15855.1 vs. uniprot
Match: A0A2D9CLD7_9BACT (tRNA-dihydrouridine synthase n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CLD7_9BACT)

HSP 1 Score: 105 bits (263), Expect = 2.280e-25
Identity = 54/75 (72.00%), Postives = 59/75 (78.67%), Query Frame = 0
Query:    1 LNDVLPSEEEKLDMLERFFARMIEYRDEAHALHVFRQRISLLGKRINGGHCKPLKNALREAKDADAVLAAIAAWR 75
            L D+ PSE+EKLDML RFF RMIEYRDE HA HVFRQ+ +LLGK INGGHC+PLKNALREAK    V  AI  WR
Sbjct:  282 LRDLHPSEDEKLDMLLRFFDRMIEYRDEHHARHVFRQKANLLGKPINGGHCRPLKNALREAKSVQDVYDAIEGWR 356          
BLAST of mRNA_M-pyrifera_M_contig65112.15855.1 vs. uniprot
Match: A0A7Z9U8P1_9BACT (tRNA-dihydrouridine synthase family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9U8P1_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 7.160e-24
Identity = 52/83 (62.65%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 LNDVLPSEEEKLDMLERFFARMIEYRDEAHALHVFRQRISLLGKRINGGHCKPLKNALREAKDADAVLAAIAAWRARAP-GEL 82
            L+D+ PSE+EKLDML  FF RMIEYRD  HA HVFRQ+ +LLGK +NGGHC+PLK+ +REAK    V  AI  WR R   GEL
Sbjct:  143 LHDLQPSEDEKLDMLRNFFDRMIEYRDADHARHVFRQKANLLGKPLNGGHCRPLKDVMREAKSTQDVHDAIEGWRERVESGEL 225          
BLAST of mRNA_M-pyrifera_M_contig65112.15855.1 vs. uniprot
Match: A0A2A4RLC1_9BACT (tRNA-dihydrouridine synthase n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RLC1_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 4.110e-23
Identity = 51/82 (62.20%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 LNDVLPSEEEKLDMLERFFARMIEYRDEAHALHVFRQRISLLGKRINGGHCKPLKNALREAKDADAVLAAIAAWRARAPGEL 82
            L D+ PSE+EKLDML  FF RM+EYRD  HA HVFRQ+ +LLGK+INGGHC+PLKNALREAK    +  AI  WR     +L
Sbjct:  282 LTDLHPSEDEKLDMLLGFFDRMVEYRDSDHARHVFRQKANLLGKQINGGHCRPLKNALREAKTDAEIYDAIEHWRTHGAEQL 363          
BLAST of mRNA_M-pyrifera_M_contig65112.15855.1 vs. uniprot
Match: A0A3M2CQC3_9BACT (tRNA-dihydrouridine synthase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CQC3_9BACT)

HSP 1 Score: 85.5 bits (210), Expect = 7.370e-18
Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    4 VLPSEEEKLDMLERFFARMIEYRDEAHALHVFRQRISLLGKRINGGHCKPLKNALREAKDADAVLAAIAAWR 75
            V P+E+E+LD + R+F RMIE+R E HA+HV RQ+IS LG+ INGGHC+PLK+A+RE+     V  AI +WR
Sbjct:  277 VAPTEDERLDAVLRYFERMIEFRGEHHAMHVIRQKISWLGRSINGGHCRPLKDAVRESGSPAEVRGAIESWR 348          
BLAST of mRNA_M-pyrifera_M_contig65112.15855.1 vs. uniprot
Match: A0A6N2END3_9BACT (tRNA-dihydrouridine synthase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6N2END3_9BACT)

HSP 1 Score: 81.6 bits (200), Expect = 1.870e-16
Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    3 DVLPSEEEKLDMLERFFARMIEYRDEAHALHVFRQRISLLGKRINGGHCKPLKNALREAKDADAVLAAIAAWRARAP 79
            D+ PSE EK+ +   +F RM EYRD+ +ALH FRQ+IS LGK INGGHC+ LK  +R A + + + AA+ AW A AP
Sbjct:  274 DLEPSEAEKIGIARAYFERMREYRDDRYALHKFRQKISWLGKSINGGHCRALKEGVRNAPNPEEIHAALDAWLAGAP 350          
BLAST of mRNA_M-pyrifera_M_contig65112.15855.1 vs. uniprot
Match: A0A162MSJ8_9CYAN (tRNA-dihydrouridine synthase n=1 Tax=Leptolyngbya valderiana BDU 20041 TaxID=322866 RepID=A0A162MSJ8_9CYAN)

HSP 1 Score: 75.1 bits (183), Expect = 4.710e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    6 PSEEEKLDMLERFFARMIEYRDEAHALHVFRQRISLLGKRINGGHCKPLKNALREAKDADAVLAAIAAWRARAP 79
            PSE EKLD++  FF RM+ +RDE +A+   R+RIS   KRINGGHCK L+ A+R A++  AV AA+  W+   P
Sbjct:  284 PSEHEKLDIVHAFFDRMLTFRDEHYAMTHIRRRISWFAKRINGGHCKALREAIRTAENPAAVEAALEFWKVSGP 357          
BLAST of mRNA_M-pyrifera_M_contig65112.15855.1 vs. uniprot
Match: A0A3B1DDT4_9ZZZZ (tRNA-dihydrouridine synthase DusB n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DDT4_9ZZZZ)

HSP 1 Score: 70.9 bits (172), Expect = 1.770e-12
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    6 PSEEEKLDMLERFFARMIEYRDEAHALHVFRQRISLLGKRINGGHCKPLKNALREAKDADAVLAAIAAWRA 76
            P+E EK++++ ++F RM E+RD  +ALH  RQ+I+ LGK ING HC+PLK  +R A     V AA+  W A
Sbjct:  325 PTETEKIEIVRKYFDRMCEFRDATYALHQLRQKITRLGKSINGSHCRPLKEGIRIATTPAEVHAALERWEA 395          
BLAST of mRNA_M-pyrifera_M_contig65112.15855.1 vs. uniprot
Match: A0A5Q4ERZ1_9BACT (tRNA-dihydrouridine synthase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4ERZ1_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 5.390e-8
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    6 PSEEEKLDMLERFFARMIEYRDEAHALHVFRQRISLLGKRINGGHCKPLKNALREAKDADAVLAAIAAWRA 76
            PSE EKL M+ R+FA M+E+R E +A+   R+RI+   KR+  G CKPLK  +R A D D V      WRA
Sbjct:  266 PSEAEKLAMIRRYFALMLEFRSEHYAITQIRRRITWFAKRL--GPCKPLKEVIRLAPDPDVV------WRA 328          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65112.15855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2D9CLD7_9BACT2.280e-2572.00tRNA-dihydrouridine synthase n=2 Tax=Phycisphaerae... [more]
A0A7Z9U8P1_9BACT7.160e-2462.65tRNA-dihydrouridine synthase family protein n=1 Ta... [more]
A0A2A4RLC1_9BACT4.110e-2362.20tRNA-dihydrouridine synthase n=1 Tax=bacterium Tax... [more]
A0A3M2CQC3_9BACT7.370e-1856.94tRNA-dihydrouridine synthase n=1 Tax=Planctomycete... [more]
A0A6N2END3_9BACT1.870e-1653.25tRNA-dihydrouridine synthase n=1 Tax=Phycisphaeral... [more]
A0A162MSJ8_9CYAN4.710e-1451.35tRNA-dihydrouridine synthase n=1 Tax=Leptolyngbya ... [more]
A0A3B1DDT4_9ZZZZ1.770e-1247.89tRNA-dihydrouridine synthase DusB n=1 Tax=hydrothe... [more]
A0A5Q4ERZ1_9BACT5.390e-847.89tRNA-dihydrouridine synthase n=1 Tax=Phycisphaerac... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65112contigM-pyrifera_M_contig65112:1089..1340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65112.15855.1mRNA_M-pyrifera_M_contig65112.15855.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65112 1089..1340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65112.15855.1 ID=prot_M-pyrifera_M_contig65112.15855.1|Name=mRNA_M-pyrifera_M_contig65112.15855.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp
LNDVLPSEEEKLDMLERFFARMIEYRDEAHALHVFRQRISLLGKRINGGH
CKPLKNALREAKDADAVLAAIAAWRARAPGELV*
back to top