prot_M-pyrifera_M_contig64950.15834.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64950.15834.1
Unique Nameprot_M-pyrifera_M_contig64950.15834.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: D8LCG2_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCG2_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 7.660e-21
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 0
Query:    1 MWRRRVAPASMGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSLWSCR 51
            MWRRRV+ ASMGSSYR+L+VR EWWRVVTAA++H G+LHL F+I SLWSCR
Sbjct:   71 MWRRRVSAASMGSSYRNLLVRQEWWRVVTAAVAHGGLLHLAFSISSLWSCR 121          
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: L1J379_GUITC (Rhomboid domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J379_GUITC)

HSP 1 Score: 60.1 bits (144), Expect = 1.890e-9
Identity = 22/51 (43.14%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 MWRRRVAPASMGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSLWSCR 51
            +WR R+    +GSSYR +V+  +WWR ++A++SH  ++HL FN+ S W  R
Sbjct:   32 IWRNRLDYVDLGSSYRFVVIEKQWWRTLSASLSHINLVHLGFNMFSTWQLR 82          
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: A0A7S0QCJ9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QCJ9_9CRYP)

HSP 1 Score: 57.4 bits (137), Expect = 1.470e-8
Identity = 22/51 (43.14%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MWRRRVAPASMGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSLWSCR 51
            ++R  +  A +GSSYRH+V+  ++WR +TA++SH  ++HL FN+ S W  R
Sbjct:   39 IYRNGIDYAHVGSSYRHVVIEHQYWRALTASLSHISIIHLGFNMFSSWQLR 89          
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: A0A7S2V9M1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9M1_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 8.120e-7
Identity = 21/47 (44.68%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    5 RVAPASMGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSLWSCR 51
            R+   S+G SY  +V   E+WR++TAA+SH+   HL FN+ S+W+ R
Sbjct:   59 RIGADSVGISYTRVVKGMEYWRILTAAVSHANFWHLLFNVYSVWNIR 105          
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: A0A6U5CWQ2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5CWQ2_HEMAN)

HSP 1 Score: 52.8 bits (125), Expect = 1.070e-6
Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 0
Query:   11 MGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSLWSCR 51
            +GSSY  +V+  +WWR +TA++SH  V+HL FN  S W  R
Sbjct:   42 VGSSYWLVVIEGQWWRTITASVSHLSVVHLMFNCYSTWQLR 82          
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: A0A7S0XF78_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XF78_9CHLO)

HSP 1 Score: 49.3 bits (116), Expect = 6.150e-6
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 0
Query:   11 MGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSLWS 49
            +G SY  +V + ++WR VTA+ SH  +LHL FN+ SLWS
Sbjct:   78 VGMSYAKVVAQRQYWRCVTASFSHVSLLHLLFNMSSLWS 116          
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: A0A8J9S0I8_9CHLO (Probable rhomboid-related protein 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S0I8_9CHLO)

HSP 1 Score: 48.9 bits (115), Expect = 2.600e-5
Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    6 VAPASMGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSLWS 49
            +  A +G +Y   V + E WR+VTA +SH  +LHL FN+ +LWS
Sbjct:   34 IGYAEVGLNYEQAVQKLELWRIVTAQLSHIELLHLLFNVSTLWS 77          
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: A0A522N0J0_9BACT (Rhomboid family intramembrane serine protease n=1 Tax=bacterium TaxID=1869227 RepID=A0A522N0J0_9BACT)

HSP 1 Score: 48.5 bits (114), Expect = 2.990e-5
Identity = 18/41 (43.90%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    7 APASMGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSL 47
            A   +G  Y   +   EWWR+VTAA  H+G+LH+ FN+++L
Sbjct:   31 AVVQLGVEYGPAIATGEWWRIVTAAFLHAGILHILFNMIAL 71          
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: A0A522P723_9BACT (Rhomboid family intramembrane serine protease n=2 Tax=bacterium TaxID=1869227 RepID=A0A522P723_9BACT)

HSP 1 Score: 47.4 bits (111), Expect = 9.040e-5
Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = 0
Query:   11 MGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSL 47
            +G  Y   V   EWWR+VTAA  H GVLH+ FN+++L
Sbjct:   69 LGVEYGPAVDHGEWWRIVTAAFLHGGVLHILFNMIAL 105          
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Match: I0Z371_COCSC (Rhomboid-domain-containing protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z371_COCSC)

HSP 1 Score: 47.4 bits (111), Expect = 9.240e-5
Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    6 VAPASMGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSLWS 49
            +  A +G +Y   V + E WRV+TA +SH  +LHL FN+ +LWS
Sbjct:   30 IGYADVGLNYDQAVQKLELWRVLTAQVSHVELLHLLFNLSTLWS 73          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64950.15834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LCG2_ECTSI7.660e-2176.47Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
L1J379_GUITC1.890e-943.14Rhomboid domain-containing protein (Fragment) n=1 ... [more]
A0A7S0QCJ9_9CRYP1.470e-843.14Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S2V9M1_9STRA8.120e-744.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U5CWQ2_HEMAN1.070e-648.78Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0XF78_9CHLO6.150e-651.28Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A8J9S0I8_9CHLO2.600e-545.45Probable rhomboid-related protein 4 n=1 Tax=Coccom... [more]
A0A522N0J0_9BACT2.990e-543.90Rhomboid family intramembrane serine protease n=1 ... [more]
A0A522P723_9BACT9.040e-551.35Rhomboid family intramembrane serine protease n=2 ... [more]
I0Z371_COCSC9.240e-545.45Rhomboid-domain-containing protein (Fragment) n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 2..50
e-value: 1.0E-8
score: 37.1
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 20..49
e-value: 1.1E-7
score: 31.9
NoneNo IPR availablePANTHERPTHR43731:SF20RHOMBOID-LIKE PROTEIN 13coord: 3..50
NoneNo IPR availablePANTHERPTHR43731FAMILY NOT NAMEDcoord: 3..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 10..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64950contigM-pyrifera_M_contig64950:236..391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64950.15834.1mRNA_M-pyrifera_M_contig64950.15834.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64950 224..391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64950.15834.1 ID=prot_M-pyrifera_M_contig64950.15834.1|Name=mRNA_M-pyrifera_M_contig64950.15834.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
MWRRRVAPASMGSSYRHLVVRSEWWRVVTAAISHSGVLHLCFNIMSLWSC
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom