prot_M-pyrifera_M_contig6491.15826.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6491.15826.1
Unique Nameprot_M-pyrifera_M_contig6491.15826.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length99
Homology
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 8.780e-46
Identity = 84/94 (89.36%), Postives = 88/94 (93.62%), Query Frame = 0
Query:    6 VSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGDVKVSVAGL 99
            VSELDRLTGKPRDEDVLLFAVPVCGPYMS+RDYKYKVKLTPGKQKRGKASKQAIEVFSR + TPA  K LMKG+TDNE VAAMIGDVKV+VAGL
Sbjct: 1249 VSELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASQKGLMKGITDNECVAAMIGDVKVAVAGL 1342          
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: A0A7S2HPI5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPI5_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.330e-27
Identity = 51/94 (54.26%), Postives = 71/94 (75.53%), Query Frame = 0
Query:    6 VSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGDVKVSVAGL 99
            ++EL++LTG P   DV++F VPVCGPY S++ YKYKVKLTPG  K+G+A KQA++VF+R +      + L+K V+DNE+V  +IG+VKVS  GL
Sbjct:   22 ITELNKLTGLPLPSDVIMFCVPVCGPYQSLQRYKYKVKLTPGSTKKGRAGKQALDVFTRMKECSPRERDLIKFVSDNELVQTIIGEVKVSTPGL 115          
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: A0A061RK70_9CHLO (Nuclear export mediator factor nemf-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK70_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 4.410e-27
Identity = 49/94 (52.13%), Postives = 72/94 (76.60%), Query Frame = 0
Query:    6 VSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGDVKVSVAGL 99
            ++ELD LTG PR +D+LLFA+PVC PY ++  YKY+VKLTPG+QK+GKA+K+A+++F R     +  K L++ VTD E V+ M+G V++S+ GL
Sbjct:  143 LTELDSLTGIPRXDDLLLFAIPVCAPYAALNGYKYRVKLTPGRQKKGKAAKEALDIFGRVNEATSREKELIRAVTDTEAVSGMVGPVQISMPGL 236          
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: A0A1E7FRS9_9STRA (DUF814-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRS9_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.660e-27
Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 0
Query:    1 DGAAAVSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGDVKVSVAG 98
            D     +ELD+LTGKP  ED++LFAVPVC PY S+  Y Y+VKLTPG  KRGKASKQ I++F R  + P   + L+K V DNE V A+ GDVK+S AG
Sbjct:  903 DAVDDTAELDKLTGKPLGEDLILFAVPVCAPYQSLSKYAYRVKLTPGNMKRGKASKQCIDMFLRESAVPEHCRGLIKNVADNEWVQAICGDVKISAAG 1000          
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: D8UIY8_VOLCA (NFACT-C domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UIY8_VOLCA)

HSP 1 Score: 103 bits (256), Expect = 1.800e-26
Identity = 51/98 (52.04%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    3 AAAVSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGD-VKVSVAGL 99
            AA +S LD LTG PR EDVLLFAVPVCGPY +++ YKYKVK+TPG  K+GKA++QA+E+ +RG   P   + +++ + + E + A++G  VK+S+ GL
Sbjct:    6 AARLSVLDSLTGIPRPEDVLLFAVPVCGPYNAIQSYKYKVKVTPGTVKKGKAARQALELLTRGSEVPPREREVLRALPEMEAITALVGPGVKLSMPGL 103          
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: A0A388M4N2_CHABU (CCHC-type domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M4N2_CHABU)

HSP 1 Score: 111 bits (277), Expect = 2.340e-26
Identity = 54/94 (57.45%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    6 VSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGDVKVSVAGL 99
            ++ELD LTG PR++DVLL+AVPVCGPY ++++YKY+VKLTPG  K+GKA++ A+EVF+R        K LMK V + E+VA MIG+VKV+  GL
Sbjct: 1275 LTELDSLTGVPREDDVLLYAVPVCGPYSALQNYKYRVKLTPGTVKKGKAARTAVEVFARTVDVSPRQKDLMKAVPETELVAVMIGNVKVAAPGL 1368          
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: A0A383VF94_TETOB (Uncharacterized protein (Fragment) n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VF94_TETOB)

HSP 1 Score: 110 bits (276), Expect = 3.090e-26
Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 0
Query:    3 AAAVSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGDVKVSVAGL 99
            AAA+ ELD LTG PR +DVL++AVPV GPY ++ +YK+KVKLTPG  K+GKA KQA+E+ +RGQ      + LM+ V D +MV AM+G VK+S AGL
Sbjct:  631 AAALKELDSLTGVPRADDVLMYAVPVVGPYAALANYKFKVKLTPGTLKKGKAVKQAVELLARGQEGLQRERELMRAVPDMDMVNAMVGTVKISAAGL 727          
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: UPI000B8CF237 (nuclear export mediator factor NEMF-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CF237)

HSP 1 Score: 102 bits (254), Expect = 6.000e-26
Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    1 DGAAAVSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGDVKVSVAGL 99
            D    ++++D LTG P   D+LL+AVPVCGPY +++ YKY+VK+ PG  K+GKA+K A+ +FS         K LMK  TD E+VAA+IG+VK++ AGL
Sbjct:   17 DEKGRLNDMDYLTGNPLSSDILLYAVPVCGPYSALQSYKYRVKIIPGSAKKGKAAKTAMNLFSHMSEATNREKELMKACTDPELVAAIIGNVKITAAGL 115          
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: A0A5J4XG72_9CHLO (Nuclear export mediator factor NEMF (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XG72_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 8.400e-26
Identity = 51/94 (54.26%), Postives = 71/94 (75.53%), Query Frame = 0
Query:    6 VSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGDVKVSVAGL 99
            +++LD LTG PR +DVLLFAVPVC PY +++ YKYK+KLTPG Q++GKA++QA+E+ SR   TP   K  +K V D +M+ A +G VK+S+ GL
Sbjct:  304 LTQLDSLTGVPRPDDVLLFAVPVCAPYSALQGYKYKLKLTPGTQRKGKAARQAVELLSRQPDTPVREKDFIKAVPDMDMINAFVGTVKLSMPGL 397          
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Match: A0A7S4IRG3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IRG3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.440e-25
Identity = 53/98 (54.08%), Postives = 69/98 (70.41%), Query Frame = 0
Query:    7 SELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQKRGKASKQAIEVFSRGQSTPAPHKA------LMKGVTDNEMVAAMIGDVKVSVAG 98
            +EL +LTGKP  +DVLL+A+PVC PY ++  YKY+VKLTPG QKRGKASKQ +E+F+RG      ++A      L+K V DN+ V  M GDVK+S  G
Sbjct:  172 AELGKLTGKPHPDDVLLYAIPVCAPYQTIAQYKYRVKLTPGSQKRGKASKQCLEMFARGDGGDKNNQASGRTRELIKAVGDNDWVQVMCGDVKISAPG 269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6491.15826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHP2_ECTSI8.780e-4689.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2HPI5_9STRA1.330e-2754.26Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A061RK70_9CHLO4.410e-2752.13Nuclear export mediator factor nemf-like n=1 Tax=T... [more]
A0A1E7FRS9_9STRA6.660e-2757.14DUF814-domain-containing protein n=1 Tax=Fragilari... [more]
D8UIY8_VOLCA1.800e-2652.04NFACT-C domain-containing protein (Fragment) n=1 T... [more]
A0A388M4N2_CHABU2.340e-2657.45CCHC-type domain-containing protein n=1 Tax=Chara ... [more]
A0A383VF94_TETOB3.090e-2657.73Uncharacterized protein (Fragment) n=1 Tax=Tetrade... [more]
UPI000B8CF2376.000e-2649.49nuclear export mediator factor NEMF-like n=1 Tax=C... [more]
A0A5J4XG72_9CHLO8.400e-2654.26Nuclear export mediator factor NEMF (Fragment) n=1... [more]
A0A7S4IRG3_9STRA1.440e-2554.08Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021846NFACT protein, C-terminalPFAMPF11923NFACT-Ccoord: 4..95
e-value: 9.8E-28
score: 96.2
NoneNo IPR availablePANTHERPTHR15239UNCHARACTERIZEDcoord: 6..99
NoneNo IPR availablePANTHERPTHR15239:SF6NUCLEAR EXPORT MEDIATOR FACTOR NEMFcoord: 6..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6491contigM-pyrifera_M_contig6491:3726..4431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6491.15826.1mRNA_M-pyrifera_M_contig6491.15826.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6491 3726..4431 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6491.15826.1 ID=prot_M-pyrifera_M_contig6491.15826.1|Name=mRNA_M-pyrifera_M_contig6491.15826.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
DGAAAVSELDRLTGKPRDEDVLLFAVPVCGPYMSMRDYKYKVKLTPGKQK
RGKASKQAIEVFSRGQSTPAPHKALMKGVTDNEMVAAMIGDVKVSVAGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021846NFACT-C