prot_M-pyrifera_M_contig64893.15821.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64893.15821.1
Unique Nameprot_M-pyrifera_M_contig64893.15821.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length59
Homology
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: D8LNC2_ECTSI (COP9 signalosome complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNC2_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 5.840e-17
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIK 43
            MASILH+S+IDPFDSQEAKPYKQDPEIVAMTNLV AFRNKQIK
Sbjct:  310 MASILHKSEIDPFDSQEAKPYKQDPEIVAMTNLVEAFRNKQIK 352          
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: A0A7S2I382_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I382_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 5.560e-14
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIKVTPGI 48
            MAS+LH SKI+PFDSQEA+PYK DPEIVAMTNLV AF N +IK   GI
Sbjct:  200 MASMLHASKINPFDSQEARPYKDDPEIVAMTNLVAAFHNNEIKDFEGI 247          
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: A0A7S2S7L9_9STRA (COP9 signalosome complex subunit 2 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S7L9_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 9.110e-12
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIK 43
            MA++LH S I+PFDSQEA+PY+ DPEI+AMTNLV AF N +I+
Sbjct:   16 MATMLHASSINPFDSQEARPYRNDPEIMAMTNLVQAFHNNEIE 58          
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: A0A1Z5K0U5_FISSO (COP9 signalosome complex subunit 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0U5_FISSO)

HSP 1 Score: 67.4 bits (163), Expect = 1.150e-11
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIK 43
            MAS+LH S I+PFDSQEA+PY+ DPEI+AMTNLV AF N QI+
Sbjct:  314 MASMLHASSINPFDSQEARPYRDDPEILAMTNLVQAFHNNQIQ 356          
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: A0A7S2EXZ8_TRICV (COP9 signalosome complex subunit 2 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXZ8_TRICV)

HSP 1 Score: 67.0 bits (162), Expect = 1.540e-11
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIK 43
            MAS+LH S I+PFDSQEA+PY+ DPEIVAMTNLV AF N +I+
Sbjct:  271 MASMLHASTINPFDSQEARPYRDDPEIVAMTNLVQAFHNDEIR 313          
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: K8Z5N8_NANGC (COP9 signalosome complex subunit 2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z5N8_NANGC)

HSP 1 Score: 66.6 bits (161), Expect = 2.070e-11
Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIKVTPGIDRSIIVCVLSF 59
            +AS+LH S IDPFDSQEAKPYK++ E+VAM NL++AF+N  +K    I + ++VC+L +
Sbjct:  248 LASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILK-VLVCLLLY 305          
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: A0A7S3L0Y4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L0Y4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.160e-11
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIKVTPGI 48
            +AS+LH S I+PFDSQEA+PY+ DPEIVAMTNLV AF N  I    GI
Sbjct:  330 LASMLHVSTINPFDSQEARPYRDDPEIVAMTNLVTAFHNNDIVAFEGI 377          
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: A0A4D9DBP3_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBP3_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.160e-11
Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIKVTPGIDRSIIVCVLSF 59
            +AS+LH S IDPFDSQEAKPYK++ E+VAM NL++AF+N  +K    I + ++VC+L +
Sbjct:  318 LASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILK-VLVCLLLY 375          
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: A0A6V2G376_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2G376_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.170e-11
Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIKVTPGI 48
            MAS+LH SKI+PFDSQEA+PYK D EI AMTNLV AF N +I    GI
Sbjct:  388 MASMLHASKINPFDSQEARPYKDDSEIKAMTNLVAAFHNNEITEFEGI 435          
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Match: A0A7S1DBC2_CYCTE (COP9 signalosome complex subunit 2 n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBC2_CYCTE)

HSP 1 Score: 65.9 bits (159), Expect = 2.690e-11
Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQI 42
            MAS+LH S I+PFDSQEA+PYK DPEIVAMTNLV AF + +I
Sbjct:  100 MASMLHASTINPFDSQEARPYKDDPEIVAMTNLVQAFHSNEI 141          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64893.15821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNC2_ECTSI5.840e-1793.02COP9 signalosome complex subunit 2 n=2 Tax=Ectocar... [more]
A0A7S2I382_9STRA5.560e-1475.00COP9 signalosome complex subunit 2 n=1 Tax=Helicot... [more]
A0A7S2S7L9_9STRA9.110e-1267.44COP9 signalosome complex subunit 2 (Fragment) n=1 ... [more]
A0A1Z5K0U5_FISSO1.150e-1172.09COP9 signalosome complex subunit 2 n=2 Tax=Fistuli... [more]
A0A7S2EXZ8_TRICV1.540e-1172.09COP9 signalosome complex subunit 2 (Fragment) n=1 ... [more]
K8Z5N8_NANGC2.070e-1154.24COP9 signalosome complex subunit 2 n=1 Tax=Nannoch... [more]
A0A7S3L0Y4_9STRA2.160e-1166.67COP9 signalosome complex subunit 2 n=1 Tax=Amphora... [more]
A0A4D9DBP3_9STRA2.160e-1154.24COP9 signalosome complex subunit 2 n=1 Tax=Nannoch... [more]
A0A6V2G376_9STRA2.170e-1168.75COP9 signalosome complex subunit 2 n=1 Tax=Ditylum... [more]
A0A7S1DBC2_CYCTE2.690e-1173.81COP9 signalosome complex subunit 2 n=1 Tax=Cycloph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.570coord: 1..47
e-value: 1.7E-8
score: 35.9
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 1..43
IPR037750COP9 signalosome complex subunit 2PANTHERPTHR10678:SF3COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64893contigM-pyrifera_M_contig64893:998..1174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64893.15821.1mRNA_M-pyrifera_M_contig64893.15821.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64893 998..1198 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64893.15821.1 ID=prot_M-pyrifera_M_contig64893.15821.1|Name=mRNA_M-pyrifera_M_contig64893.15821.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
MASILHESKIDPFDSQEAKPYKQDPEIVAMTNLVVAFRNKQIKVTPGIDR
SIIVCVLSF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037750COPS2