prot_M-pyrifera_M_contig64868.15818.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64868.15818.1
Unique Nameprot_M-pyrifera_M_contig64868.15818.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64868.15818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 16..133
e-value: 3.2E-11
score: 43.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64868contigM-pyrifera_M_contig64868:297..725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64868.15818.1mRNA_M-pyrifera_M_contig64868.15818.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64868 297..725 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64868.15818.1 ID=prot_M-pyrifera_M_contig64868.15818.1|Name=mRNA_M-pyrifera_M_contig64868.15818.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
EAAGALIVTLCTFCMILVGFFAWWIWTQRTKVAMRRVGLVFVEVILVGSI
LLLLWPTLFVGIPITATCVGREWVFGLGFTLVTIPVLIRGWYLREERQNP
SRINKIKVTDMHLLRITAVMLAIEVLLLIIMSGGAPALPLRGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017978GPCR_3_C