prot_M-pyrifera_M_contig64842.15815.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig64842.15815.1
Unique Name	prot_M-pyrifera_M_contig64842.15815.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	160

Homology

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BLAST of mRNA_M-pyrifera_M_contig64842.15815.1 vs. uniprot
Match: A0A5A8D3U1_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D3U1_CAFRO)

HSP 1 Score: 80.5 bits (197), Expect = 1.220e-14
Identity = 53/162 (32.72%), Postives = 81/162 (50.00%), Query Frame = 0

Query:    3 LSRPEALTIYRALDRDGTGLLDYEEFMRAFSTMDEEGGVSGGRGPSVESLTAERKRIEKEGGGEEYA--AHAAEVEKRESEDKYTMELLARLARKLKNSRSNSMVHELFRTVDTSGDHSIDRGELETLFKILGF--GDRDCSLLAGRFFKEDEAEIDYRRFM 160
            L++ E +T++RA D  G GL+DY EF+  F   D  GGV          L A+R       G +  A  A A     RES +  T  L+  +A+ +K SR    +H+ FR +D++ D+++D+ E  T     GF    R+  LL+ RFF +    +DY  F+
Sbjct:  636 LAKQECVTVFRAFDTSGEGLIDYNEFLSVFEGTDAVGGVLA----EASGLHADRMAAAAASGADPAAFMAMAERQAARESTEAATERLVTSIAQSMKRSRQLHAIHDSFRKLDSNKDNTVDKREFTTAMGRFGFHLDPREIELLSTRFFPDGAQTMDYEHFV 793

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig64842.15815.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig64842.15815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A5A8D3U1_CAFRO	1.220e-14	32.72	Uncharacterized protein n=3 Tax=Cafeteria roenberg...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 7..35 e-value: 0.75 score: 18.8 coord: 104..132 e-value: 1.2 score: 17.2
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 9..128 e-value: 8.8E-8 score: 32.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 100..135 score: 10.999
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 3..38 score: 11.947
None	No IPR available	GENE3D	1.10.238.10		coord: 8..160 e-value: 3.0E-12 score: 48.9
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 113..125
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 16..28
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 2..159

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig64842	contig	M-pyrifera_M_contig64842:714..1193 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig64842.15815.1	mRNA_M-pyrifera_M_contig64842.15815.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig64842 711..1193 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig64842.15815.1 ID=prot_M-pyrifera_M_contig64842.15815.1|Name=mRNA_M-pyrifera_M_contig64842.15815.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp
MKLSRPEALTIYRALDRDGTGLLDYEEFMRAFSTMDEEGGVSGGRGPSVE
SLTAERKRIEKEGGGEEYAAHAAEVEKRESEDKYTMELLARLARKLKNSR
SNSMVHELFRTVDTSGDHSIDRGELETLFKILGFGDRDCSLLAGRFFKED
EAEIDYRRFM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair