prot_M-pyrifera_M_contig6483.15807.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6483.15807.1
Unique Nameprot_M-pyrifera_M_contig6483.15807.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length211
Homology
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: D8LIM3_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIM3_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 5.600e-85
Identity = 153/214 (71.50%), Postives = 165/214 (77.10%), Query Frame = 0
Query:    1 MGGSWRVFFAVLSASVAGNTAFVLNAPRVGSSGVSAAAGVAGTRSATSPLYAAAPASNGGRGGVV----RTPWTCLAPGGKVGRQKVSLDRAVTSIAAPKPESKQEVETKKVTXXXXXTEVEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKEGAEKGATAGASS 210
            MGGSWRV FA+LSA  +G T FVL AP   +   +AA+ V    +A  PLYAA      G  GV     RTPWTCLAPGGKVGR KVSL+RAVTS+AAPK ES          XXXXX   EDAPMF+VL+IGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQE GKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKEGA+KGA AGAS+
Sbjct:    1 MGGSWRVGFALLSAFASGTTGFVLKAPLPNNG--AAASAVRRPATAACPLYAARSTVAAGSDGVAAPPPRTPWTCLAPGGKVGRAKVSLERAVTSVAAPKSESAXXXXXXXXXXXXXXXXXEDAPMFQVLVIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEGGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKEGAQKGAEAGASA 212          
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: A0A836C8I8_9STRA (ClpS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I8_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.210e-43
Identity = 78/135 (57.78%), Postives = 100/135 (74.07%), Query Frame = 0
Query:   66 RTPWTCLAPGGKVGRQKVSLDRAVTSIAAPKPESKQEVE--TKKVTXXXXXTEVEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKE 198
            R+P   LAPG KVG+ KV L +++ S+A PK E+++      K        TE ED PM+KVLL+GDE Y REHV+M+IQDI+P+TDN ++ EIFEEAQ+ G G CG +PEE AELYV+QFTRCEP+IYADME+E
Sbjct:   17 RSPTVALAPGSKVGKAKVQLQKSL-SLAQPKEEAQKAATDGAKAKPKQRRVTESEDCPMYKVLLLGDEGYEREHVIMAIQDIIPETDNKKSTEIFEEAQKTGTGMCGVFPEEHAELYVQQFTRCEPMIYADMEEE 150          
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: A0A7R9Z7A9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z7A9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 6.350e-20
Identity = 48/124 (38.71%), Postives = 77/124 (62.10%), Query Frame = 0
Query:   75 GGKVGRQKVSLDRAVTSIAAPKPESKQEVETKKVTXXXXXTEVEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKE 198
            G  + + KV   +AV +    K +SK+ V            + EDAP++K++L+GDEEY++ HV+  +  ++ D D  +A+ IF++AQ +GK  CG YP E AE+Y EQ  R +P+IY+D+E+E
Sbjct:    1 GAAIAKPKVQTKQAVKTETRRKEKSKRRVRASD-PISRRDEKFEDAPLYKLMLLGDEEYDQAHVIERMCALLEDMDEDQASTIFDQAQISGKAMCGKYPYEHAEMYKEQLARSDPMIYSDLEEE 123          
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: A0A7R9WV01_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WV01_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.600e-18
Identity = 49/124 (39.52%), Postives = 75/124 (60.48%), Query Frame = 0
Query:   75 GGKVGRQKVSLDRAVTSIAAPKPESKQEVETKKVTXXXXXTEVEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKE 198
            G  + +  V + +   ++A  K + KQ+ +T          E EDAPMFK++L+GD+ Y+  HVV  +  IV D D  +AAE+ ++A  AGK  CG YP E AEL+ EQ  R +P+I++D+E+E
Sbjct:   51 GAALAKPDVKIAQKTETVAKEKIKQKQKAKTHD-PISRRKDEFEDAPMFKLMLLGDDGYDAMHVVDRLCAIVDDIDEGQAAEVLQQANMAGKAMCGKYPFERAELFKEQLLRSDPMIFSDLEEE 173          
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: A0A7S0AH38_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AH38_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.300e-17
Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 0
Query:  116 EVEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKE 198
            E EDAPM++++L+GDEEY+  HVV  +  I+ D D   A+ I  +AQ AGK  CG YP E AE+Y EQ  R +PIIY+D+E+E
Sbjct:   90 EFEDAPMYRLMLLGDEEYDIVHVVERMCAILDDMDEDAASTILNQAQIAGKAMCGKYPFEHAEMYKEQLARSDPIIYSDLEEE 172          
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: A0A7S2RJ79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ79_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.590e-17
Identity = 48/130 (36.92%), Postives = 73/130 (56.15%), Query Frame = 0
Query:   73 APGGKVGRQKVSLDRAVTSIAAPKPESKQEVETKKVTXXXXXTEVEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKEGAEK 202
            APG  + + KVSL +   S       S QE +T+++       E+ D PM+KV+++GDEEY+  HVV ++  ++ D + T+A + + EAQ  G       P+E AE YV+Q  RC+P IY+  E E   K
Sbjct:   46 APGKALAKPKVSLGKPSPSF------SNQESKTEELAPPERDVEIMDTPMWKVIVLGDEEYSEGHVVETLTKVIDDMEVTKAEQTYNEAQAHGTAIATVVPQEHAEFYVQQLARCDPAIYSTCEPEKDSK 169          
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: A0A7S2PG26_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PG26_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.790e-17
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 0
Query:   82 KVSLDRAVTSIAAPKPESKQEVETKKVTXXXXXTE--VEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKE 198
            ++    AVT     K E KQ     KV       E   EDAP++KV+LIGDEEY++ H +  I DI+ D D  +AA +F +AQ  GK     YP E AELYVEQ  R +P+I++++++E
Sbjct:   67 EIGQKTAVTQKVGQKSEVKQ-THKAKVAEPVKRREHKTEDAPLYKVMLIGDEEYDQTHTIERICDIMEDVDEGQAASVFTQAQNGGKAMIAKYPFEHAELYVEQLLRSDPMIFSELQEE 184          
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: A0A7S1Y2N3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2N3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.620e-16
Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 0
Query:  118 EDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKEGAE 201
            ED  M+KVLLIGDEEY+  HVV  I +I+ D D  RA +I + AQ  GK   G YP E AE+Y EQ  R +P+IY+D+E+E  +
Sbjct:   84 EDPRMWKVLLIGDEEYDDGHVVERITEIMEDIDENRAVQILKAAQAGGKAMIGVYPLEVAEVYKEQLLRSDPLIYSDLEEENKD 167          
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: A0A1Z5J9C8_FISSO (ClpS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9C8_FISSO)

HSP 1 Score: 82.8 bits (203), Expect = 2.110e-16
Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 0
Query:   96 KPESKQEVETKKVTXXXXXTE-----VEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKEGA 200
            K  SKQ+VE KK        +      +DAPM+KV+L+ DE+Y++EHVV  +  I+ D D  +AA ++++A  AG+  CG YP E AEL+ EQ  R +P+I+ D+ +E A
Sbjct:   56 KTASKQKVEIKKKFKTDDPVQNRDDDFQDAPMYKVMLLRDEDYDQEHVVTRLCAILDDMDEDQAATVWKQAMAAGQAMCGKYPFERAELFKEQLLRSDPMIFCDLVEENA 165          
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Match: A0A7S2RJH2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJH2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.670e-16
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 0
Query:   92 IAAPKPE-SKQEVETKKVTXXXXXTEVEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTDNTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKEGAEK 202
            +  P P  S QE +T+++       E+ D PM+KV+++GDEEY+  HVV ++  ++ D + T+A + + EAQ  G       P+E AE YV+Q  RC+P IY+  E E   K
Sbjct:    7 LGKPSPSFSNQESKTEELAPPERDVEIMDTPMWKVIVLGDEEYSEGHVVETLTKVIDDMEVTKAEQTYNEAQAHGTAIATVVPQEHAEFYVQQLARCDPAIYSTCEPEKDSK 118          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6483.15807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIM3_ECTSI5.600e-8571.50ClpS domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836C8I8_9STRA3.210e-4357.78ClpS domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7R9Z7A9_9STRA6.350e-2038.71Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7R9WV01_9STRA4.600e-1839.52Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S0AH38_9STRA1.300e-1751.81Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2RJ79_9STRA1.590e-1736.92Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2PG26_9STRA1.790e-1742.02Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1Y2N3_9STRA1.620e-1651.19Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1Z5J9C8_FISSO2.110e-1641.82ClpS domain-containing protein n=2 Tax=Fistulifera... [more]
A0A7S2RJH2_9STRA3.670e-1637.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 120..186
e-value: 8.0E-9
score: 35.2
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 97..196
e-value: 1.1E-10
score: 43.0
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 116..186
NoneNo IPR availablePANTHERPTHR33473FAMILY NOT NAMEDcoord: 77..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..210
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6483contigM-pyrifera_M_contig6483:4914..9070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6483.15807.1mRNA_M-pyrifera_M_contig6483.15807.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6483 4056..9070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6483.15807.1 ID=prot_M-pyrifera_M_contig6483.15807.1|Name=mRNA_M-pyrifera_M_contig6483.15807.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp
MGGSWRVFFAVLSASVAGNTAFVLNAPRVGSSGVSAAAGVAGTRSATSPL
YAAAPASNGGRGGVVRTPWTCLAPGGKVGRQKVSLDRAVTSIAAPKPESK
QEVETKKVTKTKRVTEVEDAPMFKVLLIGDEEYNREHVVMSIQDIVPDTD
NTRAAEIFEEAQEAGKGFCGTYPEEEAELYVEQFTRCEPIIYADMEKEGA
EKGATAGASS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like