prot_M-pyrifera_M_contig64665.15784.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64665.15784.1
Unique Nameprot_M-pyrifera_M_contig64665.15784.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length67
Homology
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A7S2V6E6_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E6_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.480e-24
Identity = 45/66 (68.18%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    2 LNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            L T+PGNP++ CRV+NK+AF+ELRS+EE    L+LNGIPFMGQ+LKIGRP+KY GP+  ASTWQ L
Sbjct:  236 LTTAPGNPIIGCRVSNKFAFIELRSAEETNNCLSLNGIPFMGQLLKIGRPTKYCGPVIQASTWQAL 301          
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A7S3XTW3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW3_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 3.300e-22
Identity = 41/65 (63.08%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    3 NTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            N   GNP+++CR++ K+AF+ELR++EE    LNLNGIPFMG  LK+GRP+KY GPITPA TWQ+L
Sbjct:   87 NIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQL 151          
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A7S4D6X1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6X1_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 3.300e-22
Identity = 41/65 (63.08%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    3 NTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            N   GNP+++CR++ K+AF+ELR++EE    LNLNGIPFMG  LK+GRP+KY GPITPA TWQ+L
Sbjct:   87 NIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQL 151          
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A7S4D6W7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W7_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 5.690e-22
Identity = 41/65 (63.08%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    3 NTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            N   GNP+++CR++ K+AF+ELR++EE    LNLNGIPFMG  LK+GRP+KY GPITPA TWQ+L
Sbjct:   87 NIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQL 151          
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A835ZHK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK3_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.220e-22
Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    1 NLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            NLNT+PGNP+V CRV+NK+AF+ELRS +E    L+LN IPFMG  LKIGRPSKY+GP    +TWQ L
Sbjct:   76 NLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQAL 142          
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A7R9UCU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCU5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 7.150e-21
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 0
Query:    1 NLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            NL    GNP+V+ R+N+++AFVE RS EE T ALNLNG+PFMG +LKIGRPSKY GP + A TWQ L
Sbjct:   79 NLLHHAGNPIVSTRINSRFAFVEFRSVEEATSALNLNGVPFMGTLLKIGRPSKYVGPASQAVTWQEL 145          
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A7R9WB13_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WB13_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.260e-21
Identity = 37/66 (56.06%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    2 LNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            L+ +PGNP+VTCR + K+AF+ELR++EE   ALNLN IP++G  L++GRPSKY GP TP   W+ +
Sbjct:   51 LSKAPGNPIVTCRTSGKFAFIELRTTEEAASALNLNNIPYLGAQLRVGRPSKYTGPETPHGNWEDI 116          
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A7S1YH23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YH23_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.050e-20
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    2 LNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            LN  PGNP+  CRV+ K+AF+ELR+ +E T ALNLN IPFMG  L++ RPSKY GPI     W+ +
Sbjct:  120 LNVMPGNPITACRVSGKFAFIELRTPQEATNALNLNNIPFMGASLRVSRPSKYNGPIEAHGNWEDI 185          
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A7S1UKM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKM1_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 7.630e-20
Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    1 NLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            NL    GNPV + R+N+++AFVE R+ EECT ALNLN IPFMG  LKIGRP+KY GP + A TWQ L
Sbjct:   76 NLLHEEGNPVASTRINSRFAFVEFRTVEECTSALNLNAIPFMGMTLKIGRPAKYAGPPSTALTWQEL 142          
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Match: A0A7S4I336_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I336_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.660e-19
Identity = 36/66 (54.55%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    2 LNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGRPSKYQGPITPASTWQRL 67
            L+ +PGNP+VTCR + K+AF+ELR+++E   ALNLN IP++G  L++GRPSKY GP TP   W+ +
Sbjct:  237 LSKAPGNPIVTCRTSGKFAFIELRTTDEAASALNLNNIPYLGAQLRVGRPSKYTGPETPHGNWEDI 302          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64665.15784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V6E6_9STRA3.480e-2468.18Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S3XTW3_HETAK3.300e-2263.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D6X1_HETAK3.300e-2263.08Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4D6W7_HETAK5.690e-2263.08Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835ZHK3_9STRA7.220e-2265.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UCU5_9STRA7.150e-2164.18Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7R9WB13_9STRA8.260e-2156.06Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1YH23_9STRA5.050e-2056.06Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S1UKM1_9STRA7.630e-2062.69Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S4I336_9STRA1.660e-1954.55Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 9..46
e-value: 9.4E-5
score: 22.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..66
e-value: 5.9E-14
score: 54.1
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 2..55
NoneNo IPR availablePANTHERPTHR23139:SF9SPLICING FACTOR U2AF 65 KDA SUBUNITcoord: 2..55
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 11..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64665contigM-pyrifera_M_contig64665:201..810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64665.15784.1mRNA_M-pyrifera_M_contig64665.15784.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64665 201..810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64665.15784.1 ID=prot_M-pyrifera_M_contig64665.15784.1|Name=mRNA_M-pyrifera_M_contig64665.15784.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
NLNTSPGNPVVTCRVNNKYAFVELRSSEECTKALNLNGIPFMGQMLKIGR
PSKYQGPITPASTWQRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf