prot_M-pyrifera_M_contig64659.15783.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64659.15783.1
Unique Nameprot_M-pyrifera_M_contig64659.15783.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length119
Homology
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: D8LM18_ECTSI (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM18_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 2.930e-57
Identity = 103/119 (86.55%), Postives = 113/119 (94.96%), Query Frame = 0
Query:    1 VADLLDARPELTLGQLGNEVVADLLQAGTGVEVNESEVADAAAEVERTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALLQ 119
            VADLL++RPELTLGQ+GNEVVADL+QAGTGV+V+ESEVAD  AEVE+TGVLKVVGSLS YMIRLGDEYTKSLQ+INPHTQEYI RLKDESVVV+LAAKVQ YYERQGEMS+ ADLALLQ
Sbjct:  417 VADLLESRPELTLGQMGNEVVADLIQAGTGVDVDESEVADVLAEVEKTGVLKVVGSLSQYMIRLGDEYTKSLQNINPHTQEYIRRLKDESVVVDLAAKVQAYYERQGEMSVVADLALLQ 535          
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: A0A835YUE3_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.860e-23
Identity = 60/121 (49.59%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    1 VADLLDARPELTLGQLGNEVVADLLQAGTGVE--VNESEVADAAAEVERTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALLQ 119
            V   LD  P+L LG +  + +ADL  A    +    E + A AAA  + TG +K VG+L+ ++ RL +EYTKSLQ INPHT EYI RLKDES +V+LA  +QGYY R G+   AA +ALLQ
Sbjct:  426 VVGCLDECPDLRLGSMTADDMADLQAALPPKDKATEEEDEASAAAPQQTTGTVKAVGNLATFVQRLEEEYTKSLQKINPHTAEYILRLKDESAIVQLAGAIQGYYVRAGDFDRAATVALLQ 546          
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: A0A7S4E4E4_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4E4_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.940e-21
Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = 0
Query:    4 LLDARPELTLGQLGNEVVADLLQAGTGVEVNE-------------SEVADAAAEVERTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALLQ 119
            +L+A P+ TLG + ++ +ADL  A    +                 EV D  A  +  G +KVVG+L  Y+ RL DEY KSLQ INPHTQEY+ RL+DE  + ELA  +Q YY+R G    AA +ALL+
Sbjct:  374 ILEAHPQATLGTVDDDELADLALAAMLAKXXXXXXXXXXXXXXXPKEVIDTEAPPDEAGCVKVVGNLLTYVTRLEDEYVKSLQHINPHTQEYVARLRDERPLEELAGSIQAYYDRSGSTETAATVALLR 502          
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: A0A7S2UU87_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU87_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.200e-20
Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    1 VADLLDARPELTLGQLGNEVVADLLQAGTG-VEVNESEV----------ADAAAEVERTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALL 118
            V  +L+   +L L  + +  +ADL+ AG G ++V +  +           DA A       ++VVG+LS YM R+ +EY KSLQ INPHTQEYI RLKDE+++V LAAKVQ YY R G  + AA + L+
Sbjct:  415 VVSVLEGHQDLKLAVVADTDLADLVLAGKGELKVQDKPIDEEGEGQEVEGDAEAATNDPNEIQVVGTLSAYMRRINEEYVKSLQHINPHTQEYIARLKDEALIVALAAKVQAYYVRVGMPTEAASMCLM 543          
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: K3WGH6_GLOUD (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGH6_GLOUD)

HSP 1 Score: 91.7 bits (226), Expect = 3.820e-19
Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 0
Query:    1 VADLLDARPELTLGQLGNEVVADLLQAGTGV-----EVNESEVADAAAEVERTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALLQ 119
            +  +L+  P  +L  L +E  AD+LQAG        E ++S   D   +    G +KV G L+ ++ RL DEYTK+LQ  +PHT EYIGRL DES+++E A +VQ YYE + + + A+ +AL++
Sbjct:  377 ILKILEKNPGFSLAPLTSEDQADILQAGRDAAALDKEEDDSAYMDTLPKAGEKGKIKVSGDLAAFIERLSDEYTKALQQTDPHTSEYIGRLFDESLLIEAAHRVQNYYEHKNDTNRASTVALIR 500          
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: A0A7S4D9L0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9L0_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 9.170e-19
Identity = 54/136 (39.71%), Postives = 76/136 (55.88%), Query Frame = 0
Query:    4 LLDARPELTLGQLGNEVVADLLQAGTGVEVNESEVADAAAEVERTGV--------------------LKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALLQ 119
            +L+A P+LTLG +  E +ADL+ A    +      A A +E ER                       + VVG+L+ +  RL +EY KSLQ +NPH  EY+ RL+DE +VV+LAA+ Q YYER G+ S AA L L++
Sbjct:  406 VLEAHPKLTLGAISEEDLADLVLAAANRKAGRENPAAAVSEKERAXXXXXXXXXXXXXXAADKANAPVPVVGTLAAFAGRLEEEYRKSLQRLNPHAPEYVLRLRDERLVVQLAARAQAYYERVGDRSAAAQLCLVR 541          
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: A0A024TA01_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TA01_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.810e-18
Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    1 VADLLDARPELTLGQLGNEVVADLLQAGTG-----VEVNESEVA--DAAAEVERTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALLQ 119
            + DLL+  P  TL  L +E  ADL++AG       VE +E ++   D        G++KV G L+ ++ RL DEYTKSLQ ++PHT EYIGRL DE+++  +A +VQ Y++RQ + +  A +AL+Q
Sbjct:  377 ILDLLERNPGFTLAPLTSEDQADLIRAGANKSKEVVEDDEDDLPGQDHLPAAGGKGLIKVSGDLAAFVERLSDEYTKSLQQMDPHTTEYIGRLYDEALLSGVAKRVQNYFKRQQDHARGAAVALIQ 502          
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: W4GR61_9STRA (Eukaryotic translation initiation factor 3 subunit C n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GR61_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.590e-17
Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 0
Query:    1 VADLLDARPELTLGQLGNEVVADLLQAGTGVEVNESEVADAAAEVE---------RTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALLQ 119
            + D+LD  P   L  L +E  ADL++AG     + ++      +V            GV+KV G LS ++ RL DEYTKSLQ ++PHT +YIGRL DE+++  LA +VQ Y++RQ +    A +AL+Q
Sbjct:  368 ILDILDRNPGFKLAPLTSEDQADLIRAGATKSKDAADADXXXXDVPGQDLLPVAGAKGVIKVSGDLSAFVERLADEYTKSLQQLDPHTSDYIGRLYDEALLSGLAKRVQDYFKRQQDHVRGAAVALIQ 495          
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: A0A7S2HV13_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV13_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.170e-17
Identity = 49/118 (41.53%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    1 VADLLDARPELTLGQLGNEVVADLLQAGTGVEVNESEVADAAAEVERTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALL 118
            ++ +L+  PEL L  +G + +AD++ A  G   N  EV +     E    ++++G+L  ++ RL +EYTK+LQ INPHT EY+ RL+ ES +V+L   VQ YYER  +M  AA +ALL
Sbjct:  386 ISQILNENPELVLTSIGADDIADMILAQQG---NLEEVKEEPKVDEDANKIQIIGNLVNFVNRLDEEYTKALQKINPHTVEYVVRLRMESQLVKLCTTVQQYYERIEDMKNAASVALL 500          
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Match: A0A2P4XJ66_9STRA (Eukaryotic translation initiation factor 3 subunit C (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XJ66_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 7.160e-17
Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 0
Query:    1 VADLLDARPELTLGQLGNEVVADLLQAGTGVEVNESEVADAAAE--------------VERTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQGYYERQGEMSIAADLALLQ 119
            +  LL+  PE +L  L +E  AD+++AG   +V  +++A AAAE                + G +KV G L+ ++ RL +EYTK+LQ  +PHT EY+ RL DE++++E+A +VQ +Y R+ +   A+ +AL++
Sbjct:  346 ILTLLEKNPEFSLAPLTSEDQADIVRAGRE-KVTAAQIAAAAAEDAEEDMNFVDTLPQAGKKGTIKVSGDLAAFVDRLSEEYTKALQQTDPHTSEYVARLYDENLLIEVAERVQVFYSRKKDFERASSMALVR 477          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64659.15783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM18_ECTSI2.930e-5786.55Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YUE3_9STRA1.860e-2349.59Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4E4E4_9STRA4.940e-2142.64Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2UU87_9STRA3.200e-2043.41Eukaryotic translation initiation factor 3 subunit... [more]
K3WGH6_GLOUD3.820e-1940.32Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4D9L0_HETAK9.170e-1939.71Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A024TA01_9STRA1.810e-1842.06Eukaryotic translation initiation factor 3 subunit... [more]
W4GR61_9STRA1.590e-1739.84Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2HV13_9STRA2.170e-1741.53Eukaryotic translation initiation factor 3 subunit... [more]
A0A2P4XJ66_9STRA7.160e-1736.09Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008905Eukaryotic translation initiation factor 3 subunit C, N-terminal domainPFAMPF05470eIF-3c_Ncoord: 35..117
e-value: 3.5E-19
score: 68.6
IPR027516Eukaryotic translation initiation factor 3 subunit CPANTHERPTHR13937EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATEDcoord: 20..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64659contigM-pyrifera_M_contig64659:358..714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64659.15783.1mRNA_M-pyrifera_M_contig64659.15783.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64659 358..714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64659.15783.1 ID=prot_M-pyrifera_M_contig64659.15783.1|Name=mRNA_M-pyrifera_M_contig64659.15783.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp
VADLLDARPELTLGQLGNEVVADLLQAGTGVEVNESEVADAAAEVERTGV
LKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIGRLKDESVVVELAAKVQ
GYYERQGEMSIAADLALLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008905EIF3C_N_dom
IPR027516EIF3C