prot_M-pyrifera_M_contig64633.15781.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64633.15781.1
Unique Nameprot_M-pyrifera_M_contig64633.15781.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length126
Homology
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BLAST of mRNA_M-pyrifera_M_contig64633.15781.1 vs. uniprot
Match: A0A7S3JZB0_9STRA (Nucleolar protein 16 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZB0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 5.360e-6
Identity = 30/99 (30.30%), Postives = 56/99 (56.57%), Query Frame = 0 
Query:   12 DSRIKAKWDRTKTRRQNLEALGIAEDLNGEDEVRKTAEGKLKGLAAIGEARTEEIRKALESRNEEKKDWVSPEVTRYLERLRSKFGDNVRAMARDIKIN 110
            DS I+ KWD  KT+++N+ ALG+A+D N   +  K    +   +A     +T+++ +A ++    ++  +S E  RY+ +L +K G+N  +M  D+  N
Sbjct:   48 DSYIRQKWDPKKTKKENMRALGLADDANAAVKTNKQITSEFVKMALHSHPQTDDLERADKN---PRRSQLSAEKKRYIAKLIAKHGNNYESMVHDLTAN 143
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BLAST of mRNA_M-pyrifera_M_contig64633.15781.1 vs. uniprot
Match: A0A5J4YSW2_PORPP (Nucleolar protein 16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSW2_PORPP)

HSP 1 Score: 52.4 bits (124), Expect = 7.430e-6
Identity = 41/123 (33.33%), Postives = 61/123 (49.59%), Query Frame = 0 
Query:    7 KINFSDSRIKAKWDRTKTRRQNLEALGIAEDLNGEDEVRKTAEG--------KLKGLAAIGEARTEEIRKALESRNEEKKDWVSPEVTRYLERLRSKFGDNVRAMARDIKINYLQHPEGYLRR 121
            K + +D+ ++  WD +K  R+NL+A+G+A   N     +  A G        +++ LAA+GE   E  R   E               + LE+L +K GD+  AMARDIKIN +QH    L R
Sbjct:   34 KQHVADATVREAWDNSKNVRENLDAIGLAARANAPLNNKAKASGDAQTAVVARMEELAAVGEK--EAPRHPAEGE------------AQVLEKLIAKHGDDYEAMARDIKINTMQHTSRVLER 142
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64633.15781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3JZB0_9STRA5.360e-630.30Nucleolar protein 16 n=1 Tax=Aureoumbra lagunensis... [more]
A0A5J4YSW2_PORPP7.430e-633.33Nucleolar protein 16 n=1 Tax=Porphyridium purpureu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019002Ribosome biogenesis protein Nop16PFAMPF09420Nop16coord: 64..125
e-value: 1.6E-11
score: 44.7
IPR019002Ribosome biogenesis protein Nop16PANTHERPTHR13243HSPC111 PROTEIN-RELATEDcoord: 5..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64633contigM-pyrifera_M_contig64633:905..1356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64633.15781.1mRNA_M-pyrifera_M_contig64633.15781.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64633 905..1356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64633.15781.1 ID=prot_M-pyrifera_M_contig64633.15781.1|Name=mRNA_M-pyrifera_M_contig64633.15781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
KVSRKQKINFSDSRIKAKWDRTKTRRQNLEALGIAEDLNGEDEVRKTAEG
KLKGLAAIGEARTEEIRKALESRNEEKKDWVSPEVTRYLERLRSKFGDNV
RAMARDIKINYLQHPEGYLRRMFDRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019002Ribosome_biogenesis_Nop16