prot_M-pyrifera_M_contig64626.15772.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64626.15772.1
Unique Nameprot_M-pyrifera_M_contig64626.15772.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length187
Homology
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BLAST of mRNA_M-pyrifera_M_contig64626.15772.1 vs. uniprot
Match: A0A7C2AZ02_9BACT (Tetratricopeptide repeat protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2AZ02_9BACT)

HSP 1 Score: 86.7 bits (213), Expect = 1.880e-16
Identity = 62/173 (35.84%), Postives = 85/173 (49.13%), Query Frame = 0 
Query:   17 AAPALTAPLHAPGVTTAVVDRVDDLIAEGRDLXXXXXXXXXXXXXDEAAALPGGEDRAVIWQLRVAMHLESLNDVLGRIDALSDERDDAG--IDYLYGMAFAVKAQQALDAGLNDGTIGMQMTDSQAFLERAVAAEGARYPDAYVMLSHVAYMNSDFDTALSAADKAVGHFPK 187
            A P   AP+       A  D V  L+ EGR L             ++AA       R  +W LR  M     ND L  +D L D +   G  +DYLYGMAFA +AQQ + AG+ D +I +   D+  FL RAV  +  R+ DA++ L+  A+   D +TA SAA+ AV   P+
Sbjct:    9 ALPLSVAPVLVTAQEPAASDEVTSLVREGRALLDQGKPAEALPLFEKAARADENRLRTRMWVLRAWMDSGRSNDTLNTLDEL-DAKGVKGPEMDYLYGMAFARRAQQNIAAGVTDASIQINFLDAVEFLGRAVKQDAERFYDAHLALATAAWYTQDLETARSAAEGAVKAQPE 180
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64626.15772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7C2AZ02_9BACT1.880e-1635.84Tetratricopeptide repeat protein n=1 Tax=Planctomy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 37..187
e-value: 8.7E-7
score: 30.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 36..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.748

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64626contigM-pyrifera_M_contig64626:788..1348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64626.15772.1mRNA_M-pyrifera_M_contig64626.15772.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64626 788..1348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64626.15772.1 ID=prot_M-pyrifera_M_contig64626.15772.1|Name=mRNA_M-pyrifera_M_contig64626.15772.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp
MHKPILLAALLLAGAPAAPALTAPLHAPGVTTAVVDRVDDLIAEGRDLLA
KNRHDDAKERFDEAAALPGGEDRAVIWQLRVAMHLESLNDVLGRIDALSD
ERDDAGIDYLYGMAFAVKAQQALDAGLNDGTIGMQMTDSQAFLERAVAAE
GARYPDAYVMLSHVAYMNSDFDTALSAADKAVGHFPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf