prot_M-pyrifera_M_contig64575.15763.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig64575.15763.1
Unique Name	prot_M-pyrifera_M_contig64575.15763.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	107

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: A0A6U4TTX4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4TTX4_HEMAN)

HSP 1 Score: 99.4 bits (246), Expect = 1.160e-23
Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = 0

Query:    1 SAITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLDN 107
            S + +LNLW   L++VSI+ R    +VLSLS N+IT+L+ FR    L ELYLR N + D+ EV +LR L+H  ILWL  NP +    S   RQ ++A LP++T LDN
Sbjct:   19 SEVKNLNLWGSDLTDVSILKRLDQVEVLSLSVNKITSLEEFRHCSHLTELYLRKNEIGDIREVEYLRGLKHLSILWLCDNPCVGSSPSEYRRQ-VIALLPKITKLDN 124

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: A0A7S3UYN6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYN6_HETAK)

HSP 1 Score: 92.8 bits (229), Expect = 6.490e-22
Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 0

Query:    3 ITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLDN 107
            +T +N+W   +S+VS+++R  N +VLS+S NRI TLKPFRS   LRELY+R N +S L EVA+L+ L   ++LWL  N   +  ++   RQ ++  LP L+ LDN
Sbjct:   25 VTTVNIWGMQISDVSVVARLANLEVLSMSLNRIDTLKPFRSCRMLRELYVRKNRLSRLEEVAYLKGLPRLQVLWLAENEA-AVVNAGCYRQFVLRQLPNLSKLDN 128

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: J3JS58_NYCOV (Protein C21orf2 (Fragment) n=1 Tax=Nyctotherus ovalis TaxID=70075 RepID=J3JS58_NYCOV)

HSP 1 Score: 94.0 bits (232), Expect = 1.050e-21
Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 0

Query:    2 AITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLDN 107
            +I +LN+W   L +VSII    N +VLSLS N I+TLK F +   L ELYLR N V+DLAEV +L SL+H R+LWL  NP      S   R +++  LP L  LDN
Sbjct:   21 SIKNLNVWGNDLDDVSIIRELPNLEVLSLSVNHISTLKDFAACPKLTELYLRKNDVADLAEVQYLTSLKHLRVLWLWDNPCAQ---SPAYRSIVIKLLPYLAKLDN 123

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: A8IV63_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IV63_CHLRE)

HSP 1 Score: 87.4 bits (215), Expect = 9.560e-20
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0

Query:    3 ITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLDN 107
            + +LNLW   L + +++++  N +VLSLS NR+ +LK FR    L+ELYLR N V DL E+  L  L+H R+LWL  NP     H +  +Q +   LPQL  LDN
Sbjct:   21 VKNLNLWGQDLDDCAVLAKLPNLEVLSLSVNRLASLKDFRHCAKLQELYLRKNDVKDLHEIQHLAGLQHLRVLWLSDNPCAD--HPNY-KQFVARTLPQLHKLDN 122

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: D8U112_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U112_VOLCA)

HSP 1 Score: 89.4 bits (220), Expect = 1.230e-19
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 0

Query:    3 ITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLDN 107
            + +LNLW   L + SI+++  N +VLSLS NR+++LK FR    L+ELYLR N V DL E+ +L  L+  R+LWL  NP     H    +Q +V  LP L  LDN
Sbjct:   21 VKNLNLWGQDLDDCSILAKLPNLEVLSLSVNRLSSLKDFRHCAKLQELYLRKNDVKDLNEIQYLVHLKDLRVLWLSDNPCAEDPHY---KQFVVRMLPNLQKLDN 122

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: A0A0L8HSF3_OCTBM (LRRcap domain-containing protein n=4 Tax=Octopus TaxID=6643 RepID=A0A0L8HSF3_OCTBM)

HSP 1 Score: 89.0 bits (219), Expect = 3.130e-19
Identity = 39/107 (36.45%), Postives = 70/107 (65.42%), Query Frame = 0

Query:    1 SAITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLDN 107
            +A+  LNLW+C LS+++++++  N +V S+S N I ++K F++   LRELY+RNN +S L E+ +L+ L + ++LW++ NP+    +    R  ++  LP +  LDN
Sbjct:   44 AAVERLNLWSCDLSDITVMNKLANLEVCSISSNFIESIKDFQNCKKLRELYVRNNNISTLGELCYLKELPNLKVLWIQKNPISELENY---RNTVIRTLPNIEKLDN 147

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: G0UWA0_TRYCI (Uncharacterized protein TCIL3000_10_4290 n=1 Tax=Trypanosoma congolense (strain IL3000) TaxID=1068625 RepID=G0UWA0_TRYCI)

HSP 1 Score: 89.0 bits (219), Expect = 3.230e-19
Identity = 43/106 (40.57%), Postives = 65/106 (61.32%), Query Frame = 0

Query:    1 SAITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLD 106
            +++ +LNLW  GL++VSI+SR  N ++L+L+ N++TTL PF +   L ELYLR N ++ + E+ +LR L     LWL  NP     H    RQ+++   P L  LD
Sbjct:   18 ASVRNLNLWGEGLTDVSIVSRLPNIEILALAANKLTTLSPFAACTQLEELYLRRNNIASMLEIKYLRHLPKLHTLWLMDNPCARHPHY---RQIVILCCPHLRQLD 120

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: A2FIT7_TRIVA (Leucine Rich Repeat family protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2FIT7_TRIVA)

HSP 1 Score: 87.4 bits (215), Expect = 5.390e-19
Identity = 44/104 (42.31%), Postives = 66/104 (63.46%), Query Frame = 0

Query:    3 ITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLD 106
            + +LN+W   L++VSII +    + ++LS N+I TLKPF +   LREL+LRNN +SD  E+ +L +L+H R LWL  NP+    +    R  ++  LPQ+T LD
Sbjct:   35 VKNLNMWGLNLTDVSIIEKMPALENIALSVNKIQTLKPFAACTKLRELFLRNNLISDFEEIGYLVNLKHLRTLWLSENPISKEPNY---RSRVIQMLPQITKLD 135

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: A0A2K3CYA1_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CYA1_CHLRE)

HSP 1 Score: 87.4 bits (215), Expect = 7.950e-19
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0

Query:    3 ITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLDN 107
            + +LNLW   L + +++++  N +VLSLS NR+ +LK FR    L+ELYLR N V DL E+  L  L+H R+LWL  NP     H +  +Q +   LPQL  LDN
Sbjct:   21 VKNLNLWGQDLDDCAVLAKLPNLEVLSLSVNRLASLKDFRHCAKLQELYLRKNDVKDLHEIQHLAGLQHLRVLWLSDNPCAD--HPNY-KQFVARTLPQLHKLDN 122

[Close]

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Match: A0A1R2AM53_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AM53_9CILI)

HSP 1 Score: 86.3 bits (212), Expect = 1.280e-18
Identity = 45/105 (42.86%), Postives = 66/105 (62.86%), Query Frame = 0

Query:    3 ITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLRELYLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALPQLTTLDN 107
            I +LNLW   + NV+I+    N ++LSLS N+I+TLKPF     L ELYLR N + DL+E+ +L+ L + ++LWL  NP     +    R+ +++ALP L  LDN
Sbjct:   22 IKNLNLWGNEIENVTILKEMPNIEILSLSVNKISTLKPFSYCKKLTELYLRKNLIQDLSEIRYLQGLPNLKVLWLWENPCAEIPNY---REAVLSALPNLVKLDN 123

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig64575.15763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6U4TTX4_HEMAN	1.160e-23	47.66	Hypothetical protein n=1 Tax=Hemiselmis andersenii...	[more]
A0A7S3UYN6_HETAK	6.490e-22	45.71	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
J3JS58_NYCOV	1.050e-21	49.06	Protein C21orf2 (Fragment) n=1 Tax=Nyctotherus ova...	[more]
A8IV63_CHLRE	9.560e-20	43.81	Predicted protein n=1 Tax=Chlamydomonas reinhardti...	[more]
D8U112_VOLCA	1.230e-19	44.76	Uncharacterized protein n=1 Tax=Volvox carteri f. ...	[more]
A0A0L8HSF3_OCTBM	3.130e-19	36.45	LRRcap domain-containing protein n=4 Tax=Octopus T...	[more]
G0UWA0_TRYCI	3.230e-19	40.57	Uncharacterized protein TCIL3000_10_4290 n=1 Tax=T...	[more]
A2FIT7_TRIVA	5.390e-19	42.31	Leucine Rich Repeat family protein n=1 Tax=Trichom...	[more]
A0A2K3CYA1_CHLRE	7.950e-19	43.81	Uncharacterized protein n=2 Tax=Chlamydomonas TaxI...	[more]
A0A1R2AM53_9CILI	1.280e-18	42.86	Uncharacterized protein n=1 Tax=Stentor coeruleus ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 1..107 e-value: 6.0E-22 score: 79.4
IPR025875	Leucine rich repeat 4	PFAM	PF12799	LRR_4	coord: 26..62 e-value: 1.5E-7 score: 31.6
None	No IPR available	PANTHER	PTHR18849	LEUCINE RICH REPEAT PROTEIN	coord: 2..107
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 3..107
IPR037390	Cilia- and flagella-associated protein 410	PANTHER	PTHR18849:SF0	PROTEIN C21ORF2	coord: 2..107
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 46..67 score: 7.242
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 24..45 score: 7.62

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig64575	contig	M-pyrifera_M_contig64575:5..325 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig64575.15763.1	mRNA_M-pyrifera_M_contig64575.15763.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig64575 5..325 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig64575.15763.1 ID=prot_M-pyrifera_M_contig64575.15763.1|Name=mRNA_M-pyrifera_M_contig64575.15763.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
SAITHLNLWACGLSNVSIISRYFNAQVLSLSDNRITTLKPFRSLLGLREL
YLRNNGVSDLAEVAWLRSLRHFRILWLRGNPMMSGRHSSIARQLIVAALP
QLTTLDN

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf
IPR025875	Leu-rich_rpt_4
IPR037390	CFAP410
IPR001611	Leu-rich_rpt