prot_M-pyrifera_M_contig6457.15761.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6457.15761.1
Unique Nameprot_M-pyrifera_M_contig6457.15761.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length98
Homology
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BLAST of mRNA_M-pyrifera_M_contig6457.15761.1 vs. uniprot
Match: D7FXU2_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU2_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 1.910e-48
Identity = 79/98 (80.61%), Postives = 86/98 (87.76%), Query Frame = 0 
Query:    1 TWVATGSCPYSTRCVFIHDPRVHGPVEAWLYAGSHPSSAYHSSDSSFFFPDLPRDPDSLDLPRGPSLYDLDPSMATTEDRAERAVYNMWYSFVSTFSE 98
            TWVATGSCPYS+RCVFIHDPRV G  EAWLYAGSH SSAYHSSDS+FFFPDLPRDPDSL LPR  SLYDLDP+M   +DRA+RAVYNMWYSFVS  ++
Sbjct:    2 TWVATGSCPYSSRCVFIHDPRVQGRQEAWLYAGSHMSSAYHSSDSAFFFPDLPRDPDSL-LPRDSSLYDLDPAMCAAKDRADRAVYNMWYSFVSVLTD 98
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BLAST of mRNA_M-pyrifera_M_contig6457.15761.1 vs. uniprot
Match: D8LHE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE0_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 3.830e-21
Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 0 
Query:    1 TWVATGSCPYSTRCVFIHDPRVHGPVEAWLYAGSHPSSAYHSSDSS-----------FFFPDLPR---------DPDSL------------DLPRGPSLYDLDPSMATTEDRAERAVYNMWYSFVSTFSE 98
            TW+ TG+CPY +RCVFIHDPR+ GP  A+LY   H  +  HS+ S            F++PD+PR         DP +              LP   + YD+DPSM  +ED  ERAVY +WY+ VST +E
Sbjct:   69 TWITTGACPYFSRCVFIHDPRIRGPTAAYLY--KHNGNRSHSTRSGGSVGSPLGRDIFYWPDMPRTDADGNEIMDPSAWMDVAQLMIVGVSSLPTVSANYDMDPSMLHSEDATERAVYQLWYTLVSTITE 196
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BLAST of mRNA_M-pyrifera_M_contig6457.15761.1 vs. uniprot
Match: A0A6H5KEG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG2_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.120e-18
Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 0 
Query:   13 RCVFIHDPRVHGPVEAWLYAGSHPSSAYHSSDSS-----------FFFPDLPR-DPDSLDLPRGPSLYDLDPSMATTEDRAERAVYNMWYSFVSTFSE 98
            RCVFIHDPR+ GP  A+LY  +H     HS+ S            F++PD+PR D D  +LP     YD+DPSM  +ED  ERAVY +WYS VST +E
Sbjct:   20 RCVFIHDPRIRGPTAAYLY--NHHGKRSHSARSGGSVGSPLGRDIFYWPDMPRTDADGNELPTVLVNYDMDPSMLHSEDATERAVYQLWYSLVSTITE 115
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BLAST of mRNA_M-pyrifera_M_contig6457.15761.1 vs. uniprot
Match: A0A7S2RNI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RNI6_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 6.250e-5
Identity = 16/30 (53.33%), Postives = 24/30 (80.00%), Query Frame = 0 
Query:    1 TWVATGSCPYSTRCVFIHDPRVHGPVEAWL 30
            TW+ATG+CP+ +RC  +HDPR+ G  ++WL
Sbjct:  127 TWIATGACPFDSRCSGLHDPRIRGNSKSWL 156
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6457.15761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXU2_ECTSI1.910e-4880.61C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LHE0_ECTSI3.830e-2140.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEG2_9PHAE1.120e-1847.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RNI6_9STRA6.250e-553.33Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 2..20
e-value: 1.0E-4
score: 22.1
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 1..21
score: 9.216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6457contigM-pyrifera_M_contig6457:250..2935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6457.15761.1mRNA_M-pyrifera_M_contig6457.15761.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6457 250..2935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6457.15761.1 ID=prot_M-pyrifera_M_contig6457.15761.1|Name=mRNA_M-pyrifera_M_contig6457.15761.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp
TWVATGSCPYSTRCVFIHDPRVHGPVEAWLYAGSHPSSAYHSSDSSFFFP
DLPRDPDSLDLPRGPSLYDLDPSMATTEDRAERAVYNMWYSFVSTFSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH