prot_M-pyrifera_M_contig64567.15760.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64567.15760.1
Unique Nameprot_M-pyrifera_M_contig64567.15760.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length50
Homology
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: A0A7S4IBS0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IBS0_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 1.880e-9
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    2 SFVDPVPEELRCPLHLGVLRDPVVVSCGHSFCKECISFNPD 42
             FV  VPEE +CP H G+L+DPVV  CGHSFCK C+    D
Sbjct:   12 DFVGKVPEETKCPYHGGLLQDPVVGPCGHSFCKTCVDSEMD 52          
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: UPI0011C44750 (E3 ubiquitin/ISG15 ligase TRIM25 n=1 Tax=Calypte anna TaxID=9244 RepID=UPI0011C44750)

HSP 1 Score: 55.1 bits (131), Expect = 1.740e-7
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 QSFVDPVPEELRCPLHLGVLRDPVVVSCGHSFCKECI 37
            Q  V  V E+L CP+ LG+ R+PV +SCGHSFCKECI
Sbjct:    4 QGAVPGVEEDLTCPICLGIYREPVSLSCGHSFCKECI 40          
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: A0A672PSQ2_SINGR (RING-type domain-containing protein n=2 Tax=Sinocyclocheilus TaxID=75365 RepID=A0A672PSQ2_SINGR)

HSP 1 Score: 50.4 bits (119), Expect = 4.920e-7
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    8 PEELRCPLHLGVLRDPVVVSCGHSFCKECISFN 40
            P++ RC +   VLRDPV +SCGHSFC++CISF+
Sbjct:    5 PDQSRCGVCEQVLRDPVSISCGHSFCRQCISFS 37          
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: A0A3Q3LGX6_9LABR (Uncharacterized protein n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3LGX6_9LABR)

HSP 1 Score: 53.1 bits (126), Expect = 7.990e-7
Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    3 FVDPVPEELRCPLHLGVLRDPVVVSCGHSFCKECI 37
            FV+P  E+L CP+ L + +DPV++SC HSFC+EC+
Sbjct:    8 FVNPWHEDLSCPICLDIFKDPVILSCSHSFCRECV 42          
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: A0A673CCY8_9TELE (RING-type domain-containing protein n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CCY8_9TELE)

HSP 1 Score: 52.0 bits (123), Expect = 1.100e-6
Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    8 PEELRCPLHLGVLRDPVVVSCGHSFCKECI 37
            PE+L CP  +G+ +DPV++SCGHSFCK C+
Sbjct:    7 PEDLTCPTCMGIFKDPVLLSCGHSFCKSCL 36          
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: UPI0005280769 (probable E3 ubiquitin-protein ligase TRIM8 n=1 Tax=Mesitornis unicolor TaxID=54374 RepID=UPI0005280769)

HSP 1 Score: 52.8 bits (125), Expect = 1.100e-6
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 0
Query:    9 EELRCPLHLGVLRDPVVVSCGHSFCKECI 37
            EEL CP+ LG+ RDPV +SC HSFCKECI
Sbjct:   12 EELTCPICLGIYRDPVSLSCSHSFCKECI 40          
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: A0A7S4I7U6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I7U6_9EUKA)

HSP 1 Score: 52.8 bits (125), Expect = 1.130e-6
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    3 FVDPVPEELRCPLHLGVLRDPVVVSCGHSFCKEC 36
            FV PV EEL CP+ L V   PV++ CGH+FCKEC
Sbjct:   12 FVSPVAEELTCPICLEVFNSPVMLECGHTFCKEC 45          
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: A0A672PAL7_SINGR (RING-type domain-containing protein n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672PAL7_SINGR)

HSP 1 Score: 49.3 bits (116), Expect = 1.650e-6
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    4 VDPVPEELRCPLHLGVLRDPVVVSCGHSFCKECI 37
            +D V EEL CP+   + +DPV++SC HSFCKEC+
Sbjct:    1 MDSVQEELSCPVCHDIFKDPVLLSCSHSFCKECL 34          
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: A0A8C9R3V3_SCLFO (Tripartite motif-containing protein 16-like n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9R3V3_SCLFO)

HSP 1 Score: 52.0 bits (123), Expect = 2.130e-6
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 0
Query:    8 PEELRCPLHLGVLRDPVVVSCGHSFCKECIS 38
            P+   CPL +G+LRDPV + CGHSFC +CIS
Sbjct:    7 PDHFSCPLCVGILRDPVAIPCGHSFCMDCIS 37          
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Match: UPI000510A507 (E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Nipponia nippon TaxID=128390 RepID=UPI000510A507)

HSP 1 Score: 51.6 bits (122), Expect = 2.850e-6
Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = 0
Query:    9 EELRCPLHLGVLRDPVVVSCGHSFCKECI 37
            E+L CP+ LG+  DPV +SCGHSFCKECI
Sbjct:   12 EDLTCPICLGIYSDPVSLSCGHSFCKECI 40          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64567.15760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4IBS0_9EUKA1.880e-958.54Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
UPI0011C447501.740e-762.16E3 ubiquitin/ISG15 ligase TRIM25 n=1 Tax=Calypte a... [more]
A0A672PSQ2_SINGR4.920e-760.61RING-type domain-containing protein n=2 Tax=Sinocy... [more]
A0A3Q3LGX6_9LABR7.990e-754.29Uncharacterized protein n=1 Tax=Labrus bergylta Ta... [more]
A0A673CCY8_9TELE1.100e-660.00RING-type domain-containing protein n=1 Tax=Sphaer... [more]
UPI00052807691.100e-672.41probable E3 ubiquitin-protein ligase TRIM8 n=1 Tax... [more]
A0A7S4I7U6_9EUKA1.130e-661.76Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A672PAL7_SINGR1.650e-655.88RING-type domain-containing protein n=1 Tax=Sinocy... [more]
A0A8C9R3V3_SCLFO2.130e-661.29Tripartite motif-containing protein 16-like n=2 Ta... [more]
UPI000510A5072.850e-668.97E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Nipp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..43
e-value: 3.0E-12
score: 48.2
NoneNo IPR availablePFAMPF15227zf-C3HC4_4coord: 13..38
e-value: 4.7E-8
score: 33.1
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 3..37
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 28..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64567contigM-pyrifera_M_contig64567:682..831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64567.15760.1mRNA_M-pyrifera_M_contig64567.15760.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64567 682..831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64567.15760.1 ID=prot_M-pyrifera_M_contig64567.15760.1|Name=mRNA_M-pyrifera_M_contig64567.15760.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=50bp
QSFVDPVPEELRCPLHLGVLRDPVVVSCGHSFCKECISFNPDGTVCFRKD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS