prot_M-pyrifera_M_contig645.15751.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig645.15751.1
Unique Nameprot_M-pyrifera_M_contig645.15751.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
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BLAST of mRNA_M-pyrifera_M_contig645.15751.1 vs. uniprot
Match: D7FRJ9_ECTSI (Trypsin domain protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRJ9_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 8.440e-13
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0 
Query:    1 METLWAAIVLVGFSVTAYLTVLAVRCAKGQSVNLPIPTNPDVKR 44
            METLWAAIVLVG SVT YLTVL VRCA+G+ V LP+PTNPD+ R
Sbjct:  804 METLWAAIVLVGCSVTTYLTVLVVRCARGEKVELPVPTNPDLDR 847
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig645.15751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRJ9_ECTSI8.440e-1377.27Trypsin domain protein n=2 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..48
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig645contigM-pyrifera_M_contig645:28908..29748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig645.15751.1mRNA_M-pyrifera_M_contig645.15751.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig645 28908..29748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig645.15751.1 ID=prot_M-pyrifera_M_contig645.15751.1|Name=mRNA_M-pyrifera_M_contig645.15751.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
METLWAAIVLVGFSVTAYLTVLAVRCAKGQSVNLPIPTNPDVKREGPR*
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