prot_M-pyrifera_M_contig64461.15737.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64461.15737.1
Unique Nameprot_M-pyrifera_M_contig64461.15737.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length121
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64461.15737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 61..117
e-value: 6.6E-6
score: 28.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..53
e-value: 3.1E-5
score: 25.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 2..39
score: 8.668
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 65..121
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64461contigM-pyrifera_M_contig64461:838..1200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64461.15737.1mRNA_M-pyrifera_M_contig64461.15737.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64461 838..1230 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64461.15737.1 ID=prot_M-pyrifera_M_contig64461.15737.1|Name=mRNA_M-pyrifera_M_contig64461.15737.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
MCPICTEPALEALELCDEHLICAACVPVVAKRTTCPVCDAALPTDGEGAR
VLSPPGRRIVRMLEKLSVACPLEPCAWSGPRGNLRDHLRISCGHVPCTLS
DKGCEFEGTAVAVVQHLASDC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
IPR008974TRAF-like