prot_M-pyrifera_M_contig64433.15734.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig64433.15734.1
Unique Nameprot_M-pyrifera_M_contig64433.15734.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length181
Homology
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BLAST of mRNA_M-pyrifera_M_contig64433.15734.1 vs. uniprot
Match: A0A6P2AJ77_9BACT (DUF4114 domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6P2AJ77_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 7.580e-6
Identity = 40/137 (29.20%), Postives = 65/137 (47.45%), Query Frame = 0 
Query:   49 GDGDAPGTLSWLNPDLQNTP--VELFNSETAAAGDEVFLPRSYSFGERIDFSYAVNGEAPVT---LRTDIEGNWGQFYIEQESSSVYLVRVEDDPSVFTDDDMNDAVFRVEFCSVPAPGASVLLGAGLSMMGLRRRR 180
            G G  P  ++ L PD         LFN+ T+  G  + LP  ++ G+ + F Y +     V      TD+  +  QF     +++     +ED    ++D+D NDA+FRV   S+P PGA   +     ++G +RRR
Sbjct:   55 GVGIDPHLITTLAPDSDEIGRGFRLFNNHTSQVGSTIELPGLFNEGDVLHFGYELLAPKRVAGQGFYTDVADDHVQFMF---NATTGFFGIEDLRLPWSDEDYNDAMFRVTAASIPGPGALACMSL---LLGFQRRR 185
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig64433.15734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6P2AJ77_9BACT7.580e-629.20DUF4114 domain-containing protein n=1 Tax=Phycisph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013424PEP-CTERM protein-sorting domainTIGRFAMTIGR02595TIGR02595coord: 158..180
e-value: 6.0E-4
score: 18.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 177..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig64433contigM-pyrifera_M_contig64433:167..709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig64433.15734.1mRNA_M-pyrifera_M_contig64433.15734.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig64433 167..709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig64433.15734.1 ID=prot_M-pyrifera_M_contig64433.15734.1|Name=mRNA_M-pyrifera_M_contig64433.15734.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
MQNKIAIAMLTMTAAMSSAALGNEVIPFEDPNILNDCGCGGVSVEWVSGD
GDAPGTLSWLNPDLQNTPVELFNSETAAAGDEVFLPRSYSFGERIDFSYA
VNGEAPVTLRTDIEGNWGQFYIEQESSSVYLVRVEDDPSVFTDDDMNDAV
FRVEFCSVPAPGASVLLGAGLSMMGLRRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013424PEP_exosort_dom