prot_M-pyrifera_M_contig13551.5995.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13551.5995.1
Unique Nameprot_M-pyrifera_M_contig13551.5995.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length55
Homology
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BLAST of mRNA_M-pyrifera_M_contig13551.5995.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 9.770e-12
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:    2 VAVCLSGHVRSFVSPAVHLSVRRNVIEAIREGGCRVDVFAYAALDDTSTLTEQ 54
            VAV +SG VRSFV P VHLS +R+V+EAI+  GC VDVF YA+L D   L EQ
Sbjct:   40 VAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASLGDEDLLEEQ 92
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BLAST of mRNA_M-pyrifera_M_contig13551.5995.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 8.690e-11
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0 
Query:    4 VCLSGHVRSFVSPAVHLSVRRNVIEAIREGGCRVDVFAYAALDDTSTLTEQV 55
            +C SG +RSFV PAVH S+R N+IE+I+  GC VDVFAY   +DT    +QV
Sbjct:    1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQV 52
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13551.5995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVJ6_9PHAE9.770e-1262.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK46_ECTSI8.690e-1155.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13551contigM-pyrifera_M_contig13551:640..804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13551.5995.1mRNA_M-pyrifera_M_contig13551.5995.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13551 640..804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13551.5995.1 ID=prot_M-pyrifera_M_contig13551.5995.1|Name=mRNA_M-pyrifera_M_contig13551.5995.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
RVAVCLSGHVRSFVSPAVHLSVRRNVIEAIREGGCRVDVFAYAALDDTST
LTEQV
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