prot_M-pyrifera_M_contig13550.5994.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13550.5994.1
Unique Nameprot_M-pyrifera_M_contig13550.5994.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length61
Homology
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BLAST of mRNA_M-pyrifera_M_contig13550.5994.1 vs. uniprot
Match: D7FRD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD6_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 5.080e-20
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0 
Query:    1 RQCVGIAAGKRHTLFVFDDGIVFSVGEGFCWQLGTTSAYTNHPVPRAVQRLPKQ 54
            +Q V +AAGKRHTLFV DDG+VFSVGEG  WQLGTTS +TNHP  RAVQRLPKQ
Sbjct:  106 KQFVDLAAGKRHTLFVSDDGLVFSVGEGLSWQLGTTSQFTNHPDRRAVQRLPKQ 159
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BLAST of mRNA_M-pyrifera_M_contig13550.5994.1 vs. uniprot
Match: A0A6H5J9Y8_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y8_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 3.300e-19
Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 0 
Query:    1 RQCVGIAAGKRHTLFVFDDGIVFSVGEGFCWQLGTTSAYTNHPVPRAVQRLPKQ 54
            +Q V +AAGKRHTLFV DDG+VFSVGEG  WQLGTTS + NHP  RAVQRLPKQ
Sbjct:  125 KQFVDLAAGKRHTLFVSDDGLVFSVGEGLSWQLGTTSQFINHPDRRAVQRLPKQ 178
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13550.5994.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRD6_ECTSI5.080e-2077.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9Y8_9PHAE3.300e-1975.93WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..59
e-value: 1.5E-8
score: 35.6
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 4..50
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 6..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13550contigM-pyrifera_M_contig13550:7979..8161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13550.5994.1mRNA_M-pyrifera_M_contig13550.5994.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13550 7978..8161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13550.5994.1 ID=prot_M-pyrifera_M_contig13550.5994.1|Name=mRNA_M-pyrifera_M_contig13550.5994.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=61bp
RQCVGIAAGKRHTLFVFDDGIVFSVGEGFCWQLGTTSAYTNHPVPRAVQR
LPKQARGKMTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens