prot_M-pyrifera_M_contig13517.5981.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13517.5981.1
Unique Nameprot_M-pyrifera_M_contig13517.5981.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length266
Homology
BLAST of mRNA_M-pyrifera_M_contig13517.5981.1 vs. uniprot
Match: D7G4S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S9_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 5.670e-45
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 0
Query:   55 DGSVRTGGAGDGATARATGRKRQRTPSWEREYQQIWKTVNDLGAEQFTGKDKKAHEARKIVERGGRAPKEARMPYVMLQGIRKKSKQRQETREIMEAAAGLVTGNTGSGRRKSAQTPRG 173
            D + R+ GA  GA      RKR R PSWER+YQQIWK V DLG+EQFTGK+KKA+EARKIVERGGRAPK+ RMPYVMLQG+RKK+KQR+E RE MEA AG+VTGN GS RRKSAQT RG
Sbjct:   39 DVTKRSDGAA-GAXXXXXXRKRPRAPSWERDYQQIWKAVTDLGSEQFTGKEKKAYEARKIVERGGRAPKDPRMPYVMLQGLRKKAKQREERREAMEAEAGVVTGNAGSARRKSAQTSRG 156          
BLAST of mRNA_M-pyrifera_M_contig13517.5981.1 vs. uniprot
Match: A0A6H5JA53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA53_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 4.830e-26
Identity = 65/119 (54.62%), Postives = 76/119 (63.87%), Query Frame = 0
Query:    2 SRGRKGTTFATADGGAQVFEAPSAYSSAQVAKLPRKPTPKASSXXXXXXXXXXDGSVRTGGAGDGATARATGRKRQRTPSWEREYQQIWKTVNDLGAEQFTGKDKKAHEARKIVERGGR 120
            +R RKG  F+T+ GG QV EAP AYSSAQ  K   +P P+  +          D + R  GA          RKR R PSWER+YQQIWK V DLG+EQFTGK+KKA+EARKIVERGGR
Sbjct:    3 ARARKGHGFSTSAGGVQVVEAPGAYSSAQNLKEKNRPKPRKKARVDGG-----DVTKRYDGAAXXXXXXXXXRKRPRAPSWERDYQQIWKAVTDLGSEQFTGKEKKAYEARKIVERGGR 116          
BLAST of mRNA_M-pyrifera_M_contig13517.5981.1 vs. uniprot
Match: K8Z355_NANGC (Uncharacterized protein (Fragment) n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z355_NANGC)

HSP 1 Score: 72.4 bits (176), Expect = 1.360e-11
Identity = 55/157 (35.03%), Postives = 80/157 (50.96%), Query Frame = 0
Query:   85 EYQQIWKTVNDLGAEQFTGKDKKAHEARKIVERGGRAPKEARMPYVMLQGIRKKSKQRQETREIMEAAAGLVTGNTGSGRRKSAQTPRGXXXXXXXXXXXXXSRGLSDRTSASFGPAPSMGMMKSGVLHISRNS------APPGVRKRMSEGGRGRG 235
            E++++WK+V DLGA Q TG +KKA++AR+IVE GG+AP   + P+ +L G R K+KQR   R+     +G+V       +R+SA                  S  + +       P P +G MK G L ++R +      A  G R     GGRGRG
Sbjct:   70 EFKKMWKSVMDLGAMQLTGYEKKAYDARRIVELGGKAPAAIKTPFNILMGKRAKAKQRDARRDNDIRESGVVVAK----KRQSAAALANQILDDGGRRKHDSSGKIGET------PYPVLGKMKGGTLFLNRGTIQRATMAKRGGRGGDKRGGRGRG 216          
BLAST of mRNA_M-pyrifera_M_contig13517.5981.1 vs. uniprot
Match: A0A835Z9Y9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y9_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 7.220e-9
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 0
Query:   93 VNDLGAEQFTGKDKKAHEARKIVERGGRAPKEARMPYVMLQGIRKKSKQRQETREIMEAAAGLV 156
            VNDLG  QFTGK KK HEA KIV  GG+APK  +MPY +L G+R K+K+R+  R   E  +G  
Sbjct:  427 VNDLGTAQFTGKQKKEHEAAKIVALGGQAPKAQKMPYKILMGMRNKAKEREAKRLQAEKESGAA 490          
BLAST of mRNA_M-pyrifera_M_contig13517.5981.1 vs. uniprot
Match: A0A3F2S2E5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S2E5_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 9.110e-5
Identity = 40/131 (30.53%), Postives = 60/131 (45.80%), Query Frame = 0
Query:   84 REYQQIWKTVNDLGAEQFTGKDKKAHEARKIVERGGRAPKEARMPYVMLQGIRKKSKQRQETREIMEAAAGLVTGNTGSGRRKSAQTPRGXXXXXXXXXXXXXSRGLSDRTSASFGPAPSMGMMKSGVLHI 214
            +E+   + +V +  +    GK++KAHEA+KI   GG+  K   +PY ML G++ K   R++ RE +   A +VTG     +RKS                   SR    R    FG   + G  K GVL +
Sbjct:   52 KEFDDTFDSVLEFASSNLKGKERKAHEAKKIEALGGKGAKNRSVPYKMLIGMKTKGVARKQRREELIKEADVVTG-----KRKSTNK----------------SRDQQKRKKVDFGVQATKGRFKGGVLDV 161          
BLAST of mRNA_M-pyrifera_M_contig13517.5981.1 vs. uniprot
Match: H3GJ80_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJ80_PHYRM)

HSP 1 Score: 53.9 bits (128), Expect = 9.670e-5
Identity = 42/136 (30.88%), Postives = 63/136 (46.32%), Query Frame = 0
Query:   84 REYQQIWKTVNDLGAEQFTGKDKKAHEARKIVERGGRAPKEARMPYVMLQGIRKKSKQRQETREIMEAAAGLVTGNTGSGRRKSAQTPRGXXXXXXXXXXXXXSRGLSDRTSASFGPAPSMGMMKSGVLHISRNSA 219
            +E+   +  V +  +    GK+KKAHEA+KI   GG+A K   +PY +L G++ K   R++ RE +   + +VTG     +RKS+                  SR    R    +G   + G  K GVL  S  SA
Sbjct:   52 KEFDDTFDLVLEFASSSLKGKEKKAHEAKKIEALGGKAAKNRSVPYKVLIGLKTKGVARKQRREELLKESDVVTG-----KRKSS----------------GDSRDHQKRKKVDYGVQATKGRFKRGVLDTSMGSA 166          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13517.5981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G4S9_ECTSI5.670e-4572.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA53_9PHAE4.830e-2654.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K8Z355_NANGC1.360e-1135.03Uncharacterized protein (Fragment) n=4 Tax=Monodop... [more]
A0A835Z9Y9_9STRA7.220e-954.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3F2S2E5_9STRA9.110e-530.53Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
H3GJ80_PHYRM9.670e-530.88Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027973Protein of unknown function DUF4602PFAMPF15375DUF4602coord: 87..168
e-value: 4.3E-14
score: 53.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13517contigM-pyrifera_M_contig13517:651..7962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13517.5981.1mRNA_M-pyrifera_M_contig13517.5981.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13517 651..7962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13517.5981.1 ID=prot_M-pyrifera_M_contig13517.5981.1|Name=mRNA_M-pyrifera_M_contig13517.5981.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
MSRGRKGTTFATADGGAQVFEAPSAYSSAQVAKLPRKPTPKASSSTSSSS
SSVGDGSVRTGGAGDGATARATGRKRQRTPSWEREYQQIWKTVNDLGAEQ
FTGKDKKAHEARKIVERGGRAPKEARMPYVMLQGIRKKSKQRQETREIME
AAAGLVTGNTGSGRRKSAQTPRGGGGGGGGGGGGGGSRGLSDRTSASFGP
APSMGMMKSGVLHISRNSAPPGVRKRMSEGGRGRGGGGGGGRGGGRGTSR
GGGRGGGRSGGRGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027973DUF4602