prot_M-pyrifera_M_contig13428.5958.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13428.5958.1
Unique Nameprot_M-pyrifera_M_contig13428.5958.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: D7G0R2_ECTSI (Sister chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R2_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 3.500e-42
Identity = 78/119 (65.55%), Postives = 94/119 (78.99%), Query Frame = 0
Query:    1 QVERITDAVAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVDAVVCR 119
            QVER+  A   L  VSD V+S +TQKRYRDVSPL+RS AL+GL+ IMLALPE YVQDKL+RY GWSLNDK  +VR LALQ++QRLLRD  S+ R+EKF  HF +R+KAM+ DVD+ V R
Sbjct:  422 QVERVFSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKAMIQDVDSAVAR 540          
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: A0A6H5J7R4_9PHAE (SCD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R4_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 3.130e-41
Identity = 78/119 (65.55%), Postives = 93/119 (78.15%), Query Frame = 0
Query:    1 QVERITDAVAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVDAVVCR 119
            QVERI  A   L  VSD V+S +TQKRYRDVSPL+RS AL+GL+ IMLALPE YVQDKL+RY GWSLNDK  +VR LALQ++QRLLRD  S+ R+EKF  HF +R+K M+ DVD+ V R
Sbjct:  200 QVERILSATETLTTVSDLVFSKITQKRYRDVSPLIRSIALEGLSKIMLALPEFYVQDKLMRYHGWSLNDKNPAVRVLALQSIQRLLRDPASSARLEKFSAHFFSRVKTMIQDVDSTVAR 318          
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: A0A4D9D590_9STRA (SCD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D590_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.030e-16
Identity = 43/115 (37.39%), Postives = 68/115 (59.13%), Query Frame = 0
Query:    5 ITDAVAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVDAVVCR 119
            +T    AL+ V +++++ V   RYRDVS  VR+  +DGL   +   P ++++D+ ++YLGW L DKAS+VR  A   + RL    V   ++E F   FL R++ ++ DVD  V R
Sbjct:  359 LTSHQTALEAVLEEIFNGVFASRYRDVSERVRADCMDGLGFFLDTYPSMFLRDQFVKYLGWMLYDKASTVRAAAAGVLLRLYSKPVYLSQLENFTARFLKRLEDLVHDVDEGVKR 473          
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: A0A6D2JWK7_9BRAS (SCD domain-containing protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2JWK7_9BRAS)

HSP 1 Score: 80.5 bits (197), Expect = 3.260e-15
Identity = 41/114 (35.96%), Postives = 69/114 (60.53%), Query Frame = 0
Query:    7 DAVAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVD--AVVC 118
            + +  L+++  K+++ +   RYRD+ P +R S +  L V +L+ P +++QD  L+YLGW+LNDKA+ VR  +L A+++L   + + P +  F   F  R+  M  DVD  A VC
Sbjct:  270 EQITTLEDMMRKIFTGLFVHRYRDIDPDIRMSCIQSLGVWILSYPSLFLQDLYLKYLGWTLNDKAAGVRKASLLALRKLYEMDENVPTLGLFTERFSNRMIEMADDVDMSAAVC 383          
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: UPI00053F2D46 (sister-chromatid cohesion protein 3 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F2D46)

HSP 1 Score: 80.1 bits (196), Expect = 4.450e-15
Identity = 36/111 (32.43%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    7 DAVAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVDAVV 117
            + +  ++E+ DK++  +   RYRD+   +R S +  L V +L+ P +++QD+ L+YLGW+LNDK++ VR  ++ A+Q L   + + P ++ F   F  R+  +  D+D  V
Sbjct:  267 EKITTIEEMMDKIFKGLFMHRYRDIDSNIRVSCIQSLGVWILSYPSLFLQDRYLKYLGWTLNDKSAGVRKASVAALQSLYEVDDNVPSLDLFTQRFSNRMIELADDIDVSV 377          
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: A0A087H5Z9_ARAAL (SCD domain-containing protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087H5Z9_ARAAL)

HSP 1 Score: 79.0 bits (193), Expect = 1.130e-14
Identity = 42/121 (34.71%), Postives = 71/121 (58.68%), Query Frame = 0
Query:    3 ERITDA---VAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVD--AVVC 118
            +R++D    +  L+ +  K+++ +   RYRD+   +R S +  L + +L+ P +++QD  L+YLGW+LNDKA+ VR  +L A+ +L   + + P +  F G F  R+  M  DVD  A VC
Sbjct:  255 KRLSDTHEQITTLEIMMKKIFTGLFVHRYRDIDSDIRMSCIQSLGIWILSYPSLFLQDMYLKYLGWTLNDKAAGVRKASLLALGKLYETDENVPTLGTFTGRFSNRMIEMADDVDMSAAVC 375          
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: A0A8K1CG28_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG28_PYTOL)

HSP 1 Score: 78.6 bits (192), Expect = 1.560e-14
Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   14 EVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVD 114
            E+S+ +++AV   RYRDV P VR  ++  L      LP+ Y++D  L+YLGW LNDK++ VR   ++ ++ L  +E  A ++E F   FLAR   M  DVD
Sbjct:  355 EMSNLLFNAVLVHRYRDVMPEVRLESVQTLGAWATTLPDHYLKDNYLKYLGWMLNDKSADVRLGVVKMLRELYENEAFAEKLELFTSRFLARFLEMCGDVD 455          
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: V4LAP0_EUTSA (SCD domain-containing protein n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4LAP0_EUTSA)

HSP 1 Score: 78.2 bits (191), Expect = 2.100e-14
Identity = 39/114 (34.21%), Postives = 68/114 (59.65%), Query Frame = 0
Query:    7 DAVAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVD--AVVC 118
            + +  L+++  K+++ +   RYRD+ P +R S +  L + + + P +++QD  L+YLGW+LNDKA+ VR  +L A+++L   + + P +  F   F  R+  M  DVD  A VC
Sbjct:  269 EQITTLEDMMRKIFTGLFVHRYRDIDPEIRMSCIQSLGIWISSYPSLFLQDLYLKYLGWTLNDKAAGVRKASLLALRKLYEMDENVPTLGLFTERFSNRMIEMADDVDMPAAVC 382          
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: A0A078JVT0_BRANA (BnaC04g51720D protein (Fragment) n=6 Tax=Brassiceae TaxID=981071 RepID=A0A078JVT0_BRANA)

HSP 1 Score: 77.8 bits (190), Expect = 2.720e-14
Identity = 40/112 (35.71%), Postives = 67/112 (59.82%), Query Frame = 0
Query:    9 VAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVD--AVVC 118
            +  L+++  K+++ +   RYRDV P +R S +  L + + + P +++QD  L+YLGW+LNDKA+ VR  +L A+++L   + + P +  F   F  R+  M  DVD  A VC
Sbjct:  261 ITTLEDMMRKIFTGLFVHRYRDVDPDIRMSCIQSLGIWISSYPSLFLQDLYLKYLGWTLNDKAAGVRKASLLALRKLYEMDENVPTLGLFTERFSNRMIEMADDVDLSAAVC 372          
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Match: M4CJN6_BRARP (SCD domain-containing protein n=9 Tax=Brassica TaxID=3705 RepID=M4CJN6_BRARP)

HSP 1 Score: 77.8 bits (190), Expect = 2.920e-14
Identity = 40/112 (35.71%), Postives = 67/112 (59.82%), Query Frame = 0
Query:    9 VAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLALPEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCGHFLARIKAMLFDVD--AVVC 118
            +  L+++  K+++ +   RYRDV P +R S +  L + + + P +++QD  L+YLGW+LNDKA+ VR  +L A+++L   + + P +  F   F  R+  M  DVD  A VC
Sbjct:  684 ITTLEDMMRKIFTGLFVHRYRDVDPDIRMSCIQSLGIWISSYPSLFLQDLYLKYLGWTLNDKAAGVRKASLLALRKLYEMDENVPTLGLFTERFSNRMIEMADDVDLSAAVC 795          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13428.5958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0R2_ECTSI3.500e-4265.55Sister chromatid cohesion complex Cohesin, subunit... [more]
A0A6H5J7R4_9PHAE3.130e-4165.55SCD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A4D9D590_9STRA2.030e-1637.39SCD domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A6D2JWK7_9BRAS3.260e-1535.96SCD domain-containing protein n=5 Tax=Coluteocarpe... [more]
UPI00053F2D464.450e-1532.43sister-chromatid cohesion protein 3 n=1 Tax=Beta v... [more]
A0A087H5Z9_ARAAL1.130e-1434.71SCD domain-containing protein n=2 Tax=Arabis TaxID... [more]
A0A8K1CG28_PYTOL1.560e-1440.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
V4LAP0_EUTSA2.100e-1434.21SCD domain-containing protein n=2 Tax=Eutrema sals... [more]
A0A078JVT0_BRANA2.720e-1435.71BnaC04g51720D protein (Fragment) n=6 Tax=Brassicea... [more]
M4CJN6_BRARP2.920e-1435.71SCD domain-containing protein n=9 Tax=Brassica Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039662Cohesin subunit Scc3/SAPANTHERPTHR11199STROMAL ANTIGENcoord: 4..117
NoneNo IPR availablePANTHERPTHR11199:SF0LD34181P-RELATEDcoord: 4..117
IPR020839Stromalin conservative domainPROSITEPS51425SCDcoord: 24..113
score: 19.687
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 23..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13428contigM-pyrifera_M_contig13428:219..6839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13428.5958.1mRNA_M-pyrifera_M_contig13428.5958.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13428 219..6839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13428.5958.1 ID=prot_M-pyrifera_M_contig13428.5958.1|Name=mRNA_M-pyrifera_M_contig13428.5958.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
QVERITDAVAALKEVSDKVYSAVTQKRYRDVSPLVRSSALDGLTVIMLAL
PEVYVQDKLLRYLGWSLNDKASSVRTLALQAMQRLLRDEVSAPRMEKFCG
HFLARIKAMLFDVDAVVCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039662Cohesin_Scc3/SA
IPR020839SCD
IPR016024ARM-type_fold