prot_M-pyrifera_M_contig13379.5940.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13379.5940.1
Unique Nameprot_M-pyrifera_M_contig13379.5940.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length935
Homology
BLAST of mRNA_M-pyrifera_M_contig13379.5940.1 vs. uniprot
Match: A0A6H5L295_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L295_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 5.010e-136
Identity = 400/1033 (38.72%), Postives = 481/1033 (46.56%), Query Frame = 0
Query:    1 QALSLFGDAAVCNFAADDQVEVEGVGADGNTVKGVVRSFHQWRAEMQWGNKKRHLGFFDQLDHASHAYNRAALYINGPDTALNPTKEGYLPPSPTGAPVRVPRNKLFVQQLPLPLITLAKAEGAASSAEYERRRQQMAGKYHAPLVGDKHQVSYVPPLPPPSRPWAGVPPADAAAXXXXXXXXXXVSEISSEPSLPTDAVPKPALELGDSVGGAGIT--ELPAVAAVAVAXXXXTVAAAPPLSKFEDAMDVDVPASL-------LPAADTGGSFFNADSSVEAR--------KAPAAVPDSGLARSPSRAAPGPVVLTPESPREKVAAGSP------GVVVTAASSAASPESPLRVVSEVVDSLIGRAVAPAAAXXXXXXXSDAVPVEAVPEEGGSRGE-----------TNEASAVHLDS--GSEIALATLAASGVAPQLGDAR--EKEDACATRGVSLPQLAMCRCPAAXXXXXXXXXXXXXXXXXXXXXXXXXXAAETLSAGRAARVNESALKKLAGEGRALSIAGSAGAGGNKVIPTXXXXXXXXXXXXXXXXXXXXLFPERNLAPVPPNGRNLSSRILMNANPVTKQGILAAEGTVSTVQSPPXXXXXXXXXXXXXXXXXXXXSA--VSGRKRKLPFGPQVAGMGDTGRSGENGNGRSGAEGGADSSGGVAS------------------------------PELTFEDVAELVWDPRSGPKPRGVAETKGPDGSRAT-RTAMERAMWERDSTLLERVAPAHAEKAMQVLQMHRHDVERAGHMLMVRHGIQVVGLSSVRTTRNSRAEQQAASNSAI--------------------------TGSSLSAGLQRRGAPASVGXXXXXXXXXXXGIRGTGACGVRLPAAEAAXXXXXXXXXXXXXXXAGKKADAQNVTREEARQAADAFKRYGRNLNEVAKALGWKKSRVVEYYYCVWKFSPGYQVWKTTRHQAGLPGVGSTGQAFGGVSSG--QSASAGLMGGGLLNATSDGMRWRGSRLRTLKTPSSQ 934
            +ALSLFGDAAVCNF AD+QVEVEGV  DG TVKGVVRSFHQWRAEMQWGNKKRHLGFF++L+HAS AYNRAALY+NGP+T LNPTKEGY+PP  TG  VRVPRNKLFVQQLPLPLI  A+ EG+ +SAE+ RRRQQM GKYH+PLVGD HQVS +PPL                 XXXXXXX     E +      T A    A +    V G G T  +LP    V V+            SK   +  V  PA         LP      ++    S+V ++        +A AA  D+      ++  P  V  +      + AAG+         +V AASS+A    P     + V       VA  A        + AV          +RG+           +  A ++ +D+  G + A A   AS   P   D    + ED     G  +         +                             ET + G+       A        R  S     G GG++                          P+ +L   P NG    + IL ++     Q  + A  T S    P                      +   +GRKR+L                                                                   P+L+FEDVAELVWDPRSGPKPRG AE +GP G+ AT R+ +E+AMW+RDS LLERVAPAHAEK+MQVLQMHRHDVERA  ML VRHGI VVGLSSVRTTRN RAE                                    G +   G Q   AP +               R +G  G         XXX             GKKADAQ VT EEA+ A DAF R+GR+LN V KALGWK+SRVVEYYYCVWK+SP YQVWK TRH+AGLPGV S G   GG  SG   S++ GL GGG+L A+SDGMRWRGSRLRTLK PSSQ
Sbjct:  279 KALSLFGDAAVCNFPADEQVEVEGVATDGTTVKGVVRSFHQWRAEMQWGNKKRHLGFFERLEHASQAYNRAALYMNGPETPLNPTKEGYVPPPLTGRSVRVPRNKLFVQQLPLPLIAQAQVEGSNNSAEFVRRRQQMRGKYHSPLVGDNHQVSRLPPLXXXXXXXXXXXXXXXXXXXXXXXXPSSTGEAAMSLLGATVAAAPGARKSESRVNGGGTTCVDLPEALQVEVS------------SKLVISQAVAAPAXXXXXXXXXLPTVVGTVTYSPVVSAVASQAVAGKGKGRATAAANDTVGCPPATKPPPAAVEASCADSLPEAAAGAETAFTTKSAIVPAASSSAGFAKPPAAAEDGVSKHRAACVAATALTSPPRGLTKAVNSTGDGTLLANRGDMMMLDLERPWRSQLADSMEVDNRMGLDEAAANTVASVATPPPADVSGIKAED-----GSIVITAGTTTTVSEVFLKAVYPAAAVAVAAEASRSQILAGGCETFTWGQTKPTEAEASVAPPSTPRRASAESERG-GGSRTADYRPVTGWERTTLMRAPSSPAPSPPQSSL---PANG----TPILASSGATRGQAGVGAAETASLAMKPLRSAVASATPASSSVTPPARSPSPNAAGRKRRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSFEDVAELVWDPRSGPKPRGAAEARGPRGAAATNRSPLEQAMWDRDSALLERVAPAHAEKSMQVLQMHRHDVERAAQMLTVRHGIHVVGLSSVRTTRNKRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNGRASFEGWQAAAAPRAPAAAKPVGTASPTHGRASGPRGXXXXXXXXXXXXGGTPRC-------GKKADAQGVTHEEAKLAGDAFMRHGRDLNAVQKALGWKRSRVVEYYYCVWKYSPAYQVWKATRHKAGLPGV-SKGAGTGGAGSGIHSSSAGGLTGGGILKASSDGMRWRGSRLRTLKAPSSQ 1278          
BLAST of mRNA_M-pyrifera_M_contig13379.5940.1 vs. uniprot
Match: D7FQ98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ98_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 3.400e-82
Identity = 198/316 (62.66%), Postives = 214/316 (67.72%), Query Frame = 0
Query:  644 DVAELVWDPRSGPKPRGVAETKGPDG-SRATRTAMERAMWERDSTLLERVAPAHAEKAMQVLQMHRHDVERAGHMLMVRHGIQVVGLSSVRTTRNSRAEQQAASNSAITGSSLSAGLQRRGAPASVGXXXXXXXXXXXGIRGTG-------ACGVRLPAAEAAXXXXXXXXXXXXXXX---------------AGKKADAQNVTREEARQAADAFKRYGRNLNEVAKALGWKKSRVVEYYYCVWKFSPGYQVWKTTRHQAGLPGVGSTGQAFGGVSSG-QSASAG-LMGGGLLNATSDGMRWRGSRLRTLKTPSSQ 934
            DVAELVWDPRSGPKPRG AE +GP G + A R+ +E+AMW+RDSTLLERVAPAHAEK+MQVLQMHRHDVERA  ML VRHGI V+GLSSVRTTRN RAE                            XXXXXXXXXXX   G         A   R P A  A      XXXXXXXXX                GKKADAQ VTREEA+ A DAF R+GR+LN V K LGWK+SRVVEYYYCVWK+SP YQVWK TRH+AGLPGV S G   GG  SG  SASAG L GGG+LNA+SDGMRWRGSRLRTLK PSSQ
Sbjct:  214 DVAELVWDPRSGPKPRGAAEARGPRGVAAANRSPLEQAMWDRDSTLLERVAPAHAEKSMQVLQMHRHDVERAAQMLTVRHGIHVMGLSSVRTTRNKRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRASFEGWQAAAAPRAPPAAKAVGTASPXXXXXXXXXXXXXXXXXXXXGAPRCGKKADAQGVTREEAKLAGDAFMRHGRDLNAVQKTLGWKRSRVVEYYYCVWKYSPAYQVWKATRHKAGLPGV-SKGAGTGGAGSGVHSASAGGLTGGGILNASSDGMRWRGSRLRTLKAPSSQ 528          
BLAST of mRNA_M-pyrifera_M_contig13379.5940.1 vs. uniprot
Match: D7FQ97_ECTSI (Chromodomain helicase-DNA-binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ97_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 5.310e-24
Identity = 52/62 (83.87%), Postives = 57/62 (91.94%), Query Frame = 0
Query:    1 QALSLFGDAAVCNFAADDQVEVEGVGADGNTVKGVVRSFHQWRAEMQWGNKKRHLGFFDQLD 62
            +ALSLFGDAAVCNF AD+QVEVEGV  DG TVKGVVRSFHQWRAEMQWGNKKRHLGFF++ +
Sbjct:  209 KALSLFGDAAVCNFPADEQVEVEGVATDGTTVKGVVRSFHQWRAEMQWGNKKRHLGFFERRE 270          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13379.5940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L295_9PHAE5.010e-13638.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ98_ECTSI3.400e-8262.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQ97_ECTSI5.310e-2483.87Chromodomain helicase-DNA-binding protein, putativ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 816..881
e-value: 3.9E-5
score: 25.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..431
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 432..461
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 462..934
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 21..85
score: 9.427
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 33..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13379contigM-pyrifera_M_contig13379:1324..7602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13379.5940.1mRNA_M-pyrifera_M_contig13379.5940.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13379 1324..7602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13379.5940.1 ID=prot_M-pyrifera_M_contig13379.5940.1|Name=mRNA_M-pyrifera_M_contig13379.5940.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=935bp
QALSLFGDAAVCNFAADDQVEVEGVGADGNTVKGVVRSFHQWRAEMQWGN
KKRHLGFFDQLDHASHAYNRAALYINGPDTALNPTKEGYLPPSPTGAPVR
VPRNKLFVQQLPLPLITLAKAEGAASSAEYERRRQQMAGKYHAPLVGDKH
QVSYVPPLPPPSRPWAGVPPADAAAATAAAAAASVVSEISSEPSLPTDAV
PKPALELGDSVGGAGITELPAVAAVAVAAAAVTVAAAPPLSKFEDAMDVD
VPASLLPAADTGGSFFNADSSVEARKAPAAVPDSGLARSPSRAAPGPVVL
TPESPREKVAAGSPGVVVTAASSAASPESPLRVVSEVVDSLIGRAVAPAA
AAAAIAIASDAVPVEAVPEEGGSRGETNEASAVHLDSGSEIALATLAASG
VAPQLGDAREKEDACATRGVSLPQLAMCRCPAAAAAAAAAAMAAAAVAAA
AGVVAAAAGAAETLSAGRAARVNESALKKLAGEGRALSIAGSAGAGGNKV
IPTPAPSDLPLRQPSPSPSPPPPLFPERNLAPVPPNGRNLSSRILMNANP
VTKQGILAAEGTVSTVQSPPPPPPPLPPATATAASASASPSAVSGRKRKL
PFGPQVAGMGDTGRSGENGNGRSGAEGGADSSGGVASPELTFEDVAELVW
DPRSGPKPRGVAETKGPDGSRATRTAMERAMWERDSTLLERVAPAHAEKA
MQVLQMHRHDVERAGHMLMVRHGIQVVGLSSVRTTRNSRAEQQAASNSAI
TGSSLSAGLQRRGAPASVGGGGGGSNGGGGGIRGTGACGVRLPAAEAAAA
AGAAATAAAAVRAAGKKADAQNVTREEARQAADAFKRYGRNLNEVAKALG
WKKSRVVEYYYCVWKFSPGYQVWKTTRHQAGLPGVGSTGQAFGGVSSGQS
ASAGLMGGGLLNATSDGMRWRGSRLRTLKTPSSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf