prot_M-pyrifera_M_contig13369.5936.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13369.5936.1
Unique Nameprot_M-pyrifera_M_contig13369.5936.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
BLAST of mRNA_M-pyrifera_M_contig13369.5936.1 vs. uniprot
Match: A0A6H5L606_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L606_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 4.270e-50
Identity = 82/106 (77.36%), Postives = 97/106 (91.51%), Query Frame = 0
Query:   21 SQEDMFFGALVTLVRNGLTDED-PALKGAYLNSYQRLVGIVVQEVGTRSTPASEMILSSFLAWEREIRKELTEPAWESRPPDLVGSWALEAAGWDGVSDIPADGSA 125
            +QEDMF+ AL+ LV++GLTDE  PAL GAYLNSY+RL+GI+VQEVGTRSTPASEM+L SFLAWEREIRKELTEPAW+SRPPDLVGSWAL+ +GWDG++D+P D SA
Sbjct:  317 TQEDMFYHALINLVKHGLTDEGVPALSGAYLNSYERLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWDGLTDLPVDSSA 422          
BLAST of mRNA_M-pyrifera_M_contig13369.5936.1 vs. uniprot
Match: A0A7S2UV57_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV57_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.600e-16
Identity = 42/116 (36.21%), Postives = 66/116 (56.90%), Query Frame = 0
Query:   20 ESQEDMFFGALVTLVRNG-------LTDEDPA--------LKGAYLNSYQRLVGIVVQEVGTRSTPASEMILSSFLAWEREIRKELTEPAWESRPPDLVGSWALEAAGWDGVSDIP 120
            +SQE +F+ A+++L+R+G       LT +           LKG+YLNS++RLV ++V+ +GT +   S  +L  F  WE ++RK +TEP W++ P +L G W L     D   D P
Sbjct:  133 DSQEKVFYEAMLSLLRDGFDGAKSYLTSDSSLRVHNAVAKLKGSYLNSFERLVSLLVETIGTGAGITSSEVLKGFSTWETQVRKNVTEPRWDALPKELTGPWMLMEG--DAAMDFP 246          
BLAST of mRNA_M-pyrifera_M_contig13369.5936.1 vs. uniprot
Match: A0A6U4GLT9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GLT9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.350e-7
Identity = 35/101 (34.65%), Postives = 53/101 (52.48%), Query Frame = 0
Query:   20 ESQEDMFFGALVTLVRNGLTDEDPALKGAY------LNSYQRLVGIVVQEVGTR---STPASEMILSSFLAWEREIRKELT-EPAWESRPPDLVGSWALEA 110
            ES    F+ ALV L  +G+       + +Y       NS QR++G++VQE+G R   S    + I + F+ WE E+R+ +T    W+  P DL G+W L A
Sbjct:  277 ESDIAWFYDALVDLCESGMATAVALEESSYGRAFCWANSMQRILGLLVQEMGLRLEGSETLEDPIFTRFVNWESELRQNITGNYGWDPTPKDLEGTWCLGA 377          
BLAST of mRNA_M-pyrifera_M_contig13369.5936.1 vs. uniprot
Match: A0A7R9UG48_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG48_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.390e-7
Identity = 32/102 (31.37%), Postives = 55/102 (53.92%), Query Frame = 0
Query:   19 NESQEDMFFGALVTLVRNGLT----DEDPALKGAYL--NSYQRLVGIVVQEVGTRSTPASEM---ILSSFLAWEREIRKELTEP-AWESRPPDLVGSWALEA 110
             ES    F+ A++ L   G+      E+ A   ++   N+ QRL+G++VQE+G R   A  +   I + F++WE ++R+ +T    W   P DL G+W+L +
Sbjct:  261 TESDSVWFYDAMIDLCETGMATAIAQEEAARARSFCWANALQRLLGLLVQEMGLRLEGAESIEDPIFTRFVSWESQLRRNITSNYGWNKHPRDLQGTWSLSS 362          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13369.5936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L606_9PHAE4.270e-5077.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UV57_9STRA4.600e-1636.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U4GLT9_9STRA1.350e-734.65Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UG48_9STRA3.390e-731.37Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.703

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13369contigM-pyrifera_M_contig13369:2990..4764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13369.5936.1mRNA_M-pyrifera_M_contig13369.5936.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13369 2990..4764 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13369.5936.1 ID=prot_M-pyrifera_M_contig13369.5936.1|Name=mRNA_M-pyrifera_M_contig13369.5936.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
MLWYAVVCCGIAVVCCAMNESQEDMFFGALVTLVRNGLTDEDPALKGAYL
NSYQRLVGIVVQEVGTRSTPASEMILSSFLAWEREIRKELTEPAWESRPP
DLVGSWALEAAGWDGVSDIPADGSAME
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