prot_M-pyrifera_M_contig13339.5924.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13339.5924.1
Unique Nameprot_M-pyrifera_M_contig13339.5924.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length318
Homology
BLAST of mRNA_M-pyrifera_M_contig13339.5924.1 vs. uniprot
Match: A0A6H5LLL6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLL6_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 1.070e-78
Identity = 161/317 (50.79%), Postives = 196/317 (61.83%), Query Frame = 0
Query:    1 QSATATPSTFSATVFPDGSLRYRFMRIGDKADWTVGVTGNSFVSPTIRNRNVRQAEIVVLDKDGLPAAPSVPAPLPYPLSSAPDAPGPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSDRTTDGHQQRQEEADGPGTEATLCRVPTVACLGSACGKAGSEVAVLWEGFACQAAAASLALSFACRFGGLEVPAVRLEDAEGSRAEAAVAAAERGEWARGWGKRKKKTWGPGWVGQEGGAGGQGGGLLCRVPRLGWVEEGHEQAVMVPVEVVWFLTGQQASESSQGQVARSAVDVGVRGLSVTGDAGLVSSHVLAFR 317
            +SA+ATPSTFS TVFPDGSLRYR+MRIGDKADWT GV+GNSFVSPTIRNR+VRQ++ + +D++GLP+A    A  P   S+ P  P                                      +G    +E+AD   TE TLCR PT+ACL  ACGKAGSEV VLWEG  C+AAA SL ++F+CR GGLEVPAV L              +  G WA G+   +++ WGP W G E      GGGL+C VPRL W E G E+AVMVPVEV+W L  +QAS+ ++ QV   A  V V GLSV GDAGL++SHVLAFR
Sbjct:  141 RSASATPSTFSTTVFPDGSLRYRYMRIGDKADWTAGVSGNSFVSPTIRNRHVRQSQFIQMDENGLPSA----AAPPEAFSATPTLPPSPGAPVSTASNSSDSTSGDDSSEVQQWGEGEAVTIIANGDGAEEEDAD---TEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAA-SLNVTFSCRIGGLEVPAVGLGGE--------TTTSSSGSWAGGF---EEEAWGPYWAGGE-----VGGGLVCEVPRLEWAEAGQEEAVMVPVEVLWSLP-EQASDRAKEQVRLGAAGVAVHGLSVLGDAGLINSHVLAFR 432          
BLAST of mRNA_M-pyrifera_M_contig13339.5924.1 vs. uniprot
Match: D7FI05_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI05_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 1.200e-77
Identity = 179/319 (56.11%), Postives = 214/319 (67.08%), Query Frame = 0
Query:    1 QSATATPSTFSATVFPDGSLRYRFMRIGDKADWTVGVTGNSFVSPTIRNRNVRQAEIVVLDKDGLP--AAPSVPAPLPYPLSSAPDAPGPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSDRTTDGHQQRQEEADGPGTEATLCRVPTVACLGSACGKAGSEVAVLWEGFACQAAAASLALSFACRFGGLEVPAVRLEDAEGSRAEAAVAAAERGEWARGWGKRKKKTWGPGWVGQEGGAGGQGGGLLCRVPRLGWVEEGHEQAVMVPVEVVWFLTGQQASESSQGQVARSAVDVGVRGLSVTGDAGLVSSHVLAFR 317
            +SA+ATPSTFS TVFPDGSLRYR+MRIGDKADWT GV+GNSFVSPTIRNR+VRQ++ + +D++GLP  AAPS         S+ P       XXXXXXXXXXXXXXX                   +G    +E+ D   TE TLCR PT+ACL  ACGKAGSEV VLWEG  C+AAA SL ++F+CR GGLEVPAV LE            A+  G  A G+   +++ WGP WVG EGG     GGL+C VPRL W E G ++AVMVPVEV+W L  +QAS+S++ QV   A  VGV GLSV GDAGL++SHVLAFR
Sbjct:  656 RSASATPSTFSTTVFPDGSLRYRYMRIGDKADWTAGVSGNSFVSPTIRNRHVRQSQFIQMDENGLPSAAAPS------EAFSATPTXXXXXXXXXXXXXXXXXXXXXDDASEVQGEGGGSAVTIIANGDGAEEEDGD---TEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAA-SLNVTFSCRIGGLEVPAVSLEGG--------ATASSSGSLAGGF---EEEAWGPDWVGGEGG-----GGLVCEVPRLEWAEAGQDEAVMVPVEVLWSLP-EQASDSAKEQVRLGAAGVGVHGLSVLGDAGLINSHVLAFR 947          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13339.5924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LLL6_9PHAE1.070e-7850.79RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FI05_ECTSI1.200e-7756.11RING-type domain-containing protein n=1 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13339contigM-pyrifera_M_contig13339:5328..8514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13339.5924.1mRNA_M-pyrifera_M_contig13339.5924.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13339 5328..8514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13339.5924.1 ID=prot_M-pyrifera_M_contig13339.5924.1|Name=mRNA_M-pyrifera_M_contig13339.5924.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=318bp
QSATATPSTFSATVFPDGSLRYRFMRIGDKADWTVGVTGNSFVSPTIRNR
NVRQAEIVVLDKDGLPAAPSVPAPLPYPLSSAPDAPGPTSTTSTSSSSTS
SSSSSSSGGGGGSSGSSSFSDRTTDGHQQRQEEADGPGTEATLCRVPTVA
CLGSACGKAGSEVAVLWEGFACQAAAASLALSFACRFGGLEVPAVRLEDA
EGSRAEAAVAAAERGEWARGWGKRKKKTWGPGWVGQEGGAGGQGGGLLCR
VPRLGWVEEGHEQAVMVPVEVVWFLTGQQASESSQGQVARSAVDVGVRGL
SVTGDAGLVSSHVLAFR*
back to top