prot_M-pyrifera_M_contig13322.5912.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13322.5912.1
Unique Nameprot_M-pyrifera_M_contig13322.5912.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length220
Homology
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BLAST of mRNA_M-pyrifera_M_contig13322.5912.1 vs. uniprot
Match: D7G3M2_ECTSI (Similar to F-box-containing protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3M2_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 6.450e-75
Identity = 127/222 (57.21%), Postives = 144/222 (64.86%), Query Frame = 0 
Query:    1 ASANTWGTDLASVRARGGFLLAASDNLSKRSWVGSDGNVRYDGKMPPLFGVFDAAPVTPPPPPAHNASENLGGKPRSK---GNLMAWLEEYLRRLNRGDYGVRSRWEER---------RGVFRRGVWLFPQEGGQGCATQVTKGVEIQVSPVLIPEECKHRKDWMWAYSVRMRLLRDHPTRPQAGLASACTWFCFYFGLGWMTSCQLSSRLWEIDGADGYHR 210
            A AN WGTDL ++RARGGFLLAA   + KR+WVG DGNVR+DGK   L GVFDAAPV PP P    A  +  G  + +   GNLM WLEEYLRRL  G Y VRS+W E          R    RGVWLFP EGG GC T VT+GVE+QVSP L PEEC  R D +WAYSVRM+LLRDHP+RP A                 M+SCQLS+R WEIDG DG+HR
Sbjct:  220 ACANRWGTDLDTIRARGGFLLAAGPQMMKRTWVGKDGNVRFDGKSGSLMGVFDAAPVVPPSPNPDGAPGSGAGNVKRRHRGGNLMTWLEEYLRRLQCGHYMVRSKWRESIRRAGEAVPRSHLLRGVWLFPAEGGDGCVTDVTQGVEVQVSPALAPEECADRSDLVWAYSVRMQLLRDHPSRPPA-----------------MSSCQLSTRHWEIDGPDGFHR 424
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BLAST of mRNA_M-pyrifera_M_contig13322.5912.1 vs. uniprot
Match: A0A6H5K0X6_9PHAE (ApaG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0X6_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 7.150e-28
Identity = 78/203 (38.42%), Postives = 92/203 (45.32%), Query Frame = 0 
Query:   23 ASDNLSKRSWVGSDGNVRYDGKMPPLFGVFDAAPVTPPPPPAHNASENLGGKPRSK---GNLMAWLEEYLRRLNR---GDYGVRSRWEER---------RGVFRRGVWLFPQEGGQGCATQVTKGVEIQVSPVLIPEECKHRKDWMWAYSVRMRLLRDHPTRPQAGLASACTWFCFYFGLGWMTSCQLSSRLWEIDGADGYHR 210
            A  +  + +WVG+DGNVR+DGK   L GVFDAAPV PP P    A  +  G  + +   GNLM WLEEYLRR+ R   G Y VRS+W E          R    RGVWLFP EGG GC T VT+                                                          M+SCQLS+R WEIDG DG+HR
Sbjct:  643 APSSRGRVTWVGNDGNVRFDGKSGSLMGVFDAAPVLPPSPNPDGAPGSGAGDVKRRHRGGNLMTWLEEYLRRVVRLQCGHYMVRSKWRESIQRAGEAVPRSHLLRGVWLFPAEGGDGCVTDVTQA---------------------------------------------------------MSSCQLSTRHWEIDGPDGFHR 788
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13322.5912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3M2_ECTSI6.450e-7557.21Similar to F-box-containing protein 2 n=1 Tax=Ecto... [more]
A0A6H5K0X6_9PHAE7.150e-2838.42ApaG domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036767ApaG domain superfamilyGENE3D2.60.40.1470coord: 125..212
e-value: 2.9E-6
score: 28.8
NoneNo IPR availablePANTHERPTHR47463FAMILY NOT NAMEDcoord: 77..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13322contigM-pyrifera_M_contig13322:2876..8701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13322.5912.1mRNA_M-pyrifera_M_contig13322.5912.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13322 2876..8701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13322.5912.1 ID=prot_M-pyrifera_M_contig13322.5912.1|Name=mRNA_M-pyrifera_M_contig13322.5912.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
ASANTWGTDLASVRARGGFLLAASDNLSKRSWVGSDGNVRYDGKMPPLFG
VFDAAPVTPPPPPAHNASENLGGKPRSKGNLMAWLEEYLRRLNRGDYGVR
SRWEERRGVFRRGVWLFPQEGGQGCATQVTKGVEIQVSPVLIPEECKHRK
DWMWAYSVRMRLLRDHPTRPQAGLASACTWFCFYFGLGWMTSCQLSSRLW
EIDGADGYHRYALSPKNDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036767ApaG_sf