prot_M-pyrifera_M_contig13249.5894.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13249.5894.1
Unique Nameprot_M-pyrifera_M_contig13249.5894.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length283
Homology
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BLAST of mRNA_M-pyrifera_M_contig13249.5894.1 vs. uniprot
Match: D7FML9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML9_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 2.580e-107
Identity = 185/294 (62.93%), Postives = 215/294 (73.13%), Query Frame = 0 
Query:    1 IVRGFLGLESVSKQDTRVIAVGFGVFVTLVQTYYWGEFNPFTPAHKASTAADGCDFTLCYAVTGMPQKASSAVVPRSTP-TNGDETK--------EAEXXXXXXXXXRAANDLKTRKRLQTFLDALKPIGVAAVAVLALYSRQPPSRLAPGDVVSVGGDGLAACTFLPAALSNGCAPLRLAVTESGSLVLFKGAKAVPAMPA----VAAGDGGDVLWSSPAPKKATFAAED-VRLELSEDGILSVMGGDKALWSSTLTPLGKRLPAFRVEARLDAAKGALEVYKGGQLQWSSAG 280
            +VRG LGLE+ +++D R+IAV FGV VT++QTYY  +FNPFTPAH+A            Y VTGMP+ A +  VPRSTP T+ D+ K        EA+             DLKTRK++Q+FL+ALKP+GVAAVAVLALYSRQPPS + PG VV  GG GLA+C FLP  LSNGC PLR AVTE+GSLV+++G K VP +PA    V   DG +VLWSSPAPKK   AAED V+L+LSEDGILSVM GDK LWSSTLT LGKRLP FRVEARLDA KGALEVYKGGQLQWSSAG
Sbjct:  134 MVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQA-----------LYTVTGMPKTAITIEVPRSTPSTDADKAKDNGGNGAEEAKDKEKKEGEGGGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGCTPLRAAVTETGSLVVYRG-KEVPVLPAAKKKVEGDDGPEVLWSSPAPKK--LAAEDEVQLDLSEDGILSVMAGDKKLWSSTLTTLGKRLPNFRVEARLDAVKGALEVYKGGQLQWSSAG 413
[Close]
BLAST of mRNA_M-pyrifera_M_contig13249.5894.1 vs. uniprot
Match: A0A6H5JUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV5_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 6.480e-68
Identity = 127/224 (56.70%), Postives = 157/224 (70.09%), Query Frame = 0 
Query:    1 IVRGFLGLESVSKQDTRVIAVGFGVFVTLVQTYYWGEFNPFTPAHKASTAADGCDFTLCYAVTGMPQKASSAVVPRSTP-TNGDETK--------EAEXXXXXXXXXRAANDLKTRKRLQTFLDALKPIGVAAVAVLALYSRQPPSRLAPGDVVSVGGDGLAACTFLPAALSNGCAPLRLAVTESGSLVLFKGAKAVPAMPA----VAAGDGGDVLWSSPAPKK 211
            +VRG LGLE+ +++D R+IAV FGV VT++QTYY  +FNPFTPAH+A++ A        YAVTGMP+ A +  VPRSTP T+ D+ K        E +             DLKTRK++Q+FL+ALKP+GVAAVAVLALYSRQPPS + PG VV  GG GLA+C FLP  LSNGC PLR AVTE+GSLV+++G K VP +PA    V   DG +VLWSSPAPKK
Sbjct:  202 MVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQATSPA-------LYAVTGMPKTAITIEVPRSTPSTDADKAKDNGGNGAEETKGKEKKEGEGEGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGCTPLRAAVTETGSLVVYRG-KEVPVLPAAKKKVEGDDGAEVLWSSPAPKK 417
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13249.5894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FML9_ECTSI2.580e-10762.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUV5_9PHAE6.480e-6856.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 18..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13249contigM-pyrifera_M_contig13249:146..6264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13249.5894.1mRNA_M-pyrifera_M_contig13249.5894.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13249 146..6264 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13249.5894.1 ID=prot_M-pyrifera_M_contig13249.5894.1|Name=mRNA_M-pyrifera_M_contig13249.5894.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=283bp
IVRGFLGLESVSKQDTRVIAVGFGVFVTLVQTYYWGEFNPFTPAHKASTA
ADGCDFTLCYAVTGMPQKASSAVVPRSTPTNGDETKEAEEKKKKEEEERA
ANDLKTRKRLQTFLDALKPIGVAAVAVLALYSRQPPSRLAPGDVVSVGGD
GLAACTFLPAALSNGCAPLRLAVTESGSLVLFKGAKAVPAMPAVAAGDGG
DVLWSSPAPKKATFAAEDVRLELSEDGILSVMGGDKALWSSTLTPLGKRL
PAFRVEARLDAAKGALEVYKGGQLQWSSAGMD*
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