prot_M-pyrifera_M_contig1323.5885.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1323.5885.1
Unique Nameprot_M-pyrifera_M_contig1323.5885.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length161
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig1323.5885.1 vs. uniprot
Match: D7G7K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K7_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 3.940e-74
Identity = 112/157 (71.34%), Postives = 134/157 (85.35%), Query Frame = 0 
Query:    2 SKINSELLDQQLKAEAPVAEANCAKLRSMWASEMAKDEPNLDVKYQYALTLIKTRSNDKNREGLSLLQGLADCSYHVEECYYSMALAMYRMGRFQDCRDMVEVVLRMDPDMPSAQTLHKAVKEAAVRRTSQDVLVVVAGGVLMSGLGLAAALLLNSR 158
            SK+NSELLDQQLKAEAPVAEA+C +LR MW  E  KDEPNLD+K+QYALTLIKTRS+DKNREG+SLL+GLA+ SYHV ECYYSMALA+YRMGR+++CR MVE+VLRMDPDMP+AQTLHKAV+EA  RR ++ V  V AGG  ++GLG+    LL+ R
Sbjct:    3 SKVNSELLDQQLKAEAPVAEASCPRLRDMWLQESNKDEPNLDIKFQYALTLIKTRSHDKNREGMSLLEGLAESSYHVGECYYSMALALYRMGRYEECRSMVEIVLRMDPDMPAAQTLHKAVQEAVARR-NETVRNVAAGGAAVAGLGILVGALLSRR 158
[Close]
BLAST of mRNA_M-pyrifera_M_contig1323.5885.1 vs. uniprot
Match: W7TD11_9STRA (Mitochondrial fission 1 protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD11_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.620e-17
Identity = 47/155 (30.32%), Postives = 86/155 (55.48%), Query Frame = 0 
Query:    3 KINSELLDQQLKAEAPVAEANCAKLRSMWASEMAKDEPNLDVKYQYALTLIKTRSNDKNREGLSLLQGLADCSYHVEECYYSMALAMYRMGRFQDCRDMVEVVLRMDPDMPSAQTLHKAVKEAAVRRTSQDVLVVVAGGVLMSGLGLAAALLLNS 157
            K + ++ +Q+L+ EA  ++       + W +E  K +P+L+VK+ YA  L  + S      G+ LL  L    ++VEEC Y++A+ +Y    +++CR++V+ +LR++PD      LH  VK+A  +   QD+ + V     +  +G  AA+LL +
Sbjct:    4 KEDRDIFEQKLQVEAKASKEQIPDKEAAWEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAARFNVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAK---QDLAIGVXXXXXV--IGATAAILLGA 153
[Close]
BLAST of mRNA_M-pyrifera_M_contig1323.5885.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.900e-14
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 0 
Query:    9 LDQQLKAEAPVAEANCAKLRSMWASEMAK-DEPNLDVKYQYALTLIKTRSNDKNREGLSLLQGLADCSYHVEECYYSMALAMYRMGRFQDCRDMVEVVLRMDPDMPS 114
            LD QL  E  +A+     +R ++   +   D  +L++K+  +L LIK+     N EGL LL  L    YH  +CYYS+AL +YRMGRF++ R   E++LR   D P+
Sbjct:   10 LDAQLSHEENLAQDALPNVRKVYVKSLETGDAADLNLKFSLSLLLIKSAKRRDNEEGLELLSELVAAGYHTTDCYYSVALGLYRMGRFEESRTQCEMLLRRIDDPPA 116
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1323.5885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7K7_ECTSI3.940e-7471.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TD11_9STRA3.620e-1730.32Mitochondrial fission 1 protein n=2 Tax=Monodopsid... [more]
A0A835YNR4_9STRA2.900e-1438.32Cyclin N-terminal domain-containing protein n=1 Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 15..159
e-value: 5.5E-27
score: 96.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 19..153
IPR028061Fis1, C-terminal tetratricopeptide repeatPFAMPF14853Fis1_TPR_Ccoord: 80..126
e-value: 5.0E-10
score: 39.3
IPR016543Mitochondria fission 1 proteinPANTHERPTHR13247TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11coord: 14..144
NoneNo IPR availablePANTHERPTHR13247:SF0MITOCHONDRIAL FISSION 1 PROTEINcoord: 14..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..160
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 79..112
score: 8.553

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1323contigM-pyrifera_M_contig1323:7039..18873 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1323.5885.1mRNA_M-pyrifera_M_contig1323.5885.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1323 7039..18873 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1323.5885.1 ID=prot_M-pyrifera_M_contig1323.5885.1|Name=mRNA_M-pyrifera_M_contig1323.5885.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp
MSKINSELLDQQLKAEAPVAEANCAKLRSMWASEMAKDEPNLDVKYQYAL
TLIKTRSNDKNREGLSLLQGLADCSYHVEECYYSMALAMYRMGRFQDCRD
MVEVVLRMDPDMPSAQTLHKAVKEAAVRRTSQDVLVVVAGGVLMSGLGLA
AALLLNSRRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR028061Fis1_TPR_C
IPR016543Fis1
IPR013026TPR-contain_dom