prot_M-pyrifera_M_contig13217.5884.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13217.5884.1
Unique Nameprot_M-pyrifera_M_contig13217.5884.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: D7FYI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI8_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 1.120e-61
Identity = 91/115 (79.13%), Postives = 100/115 (86.96%), Query Frame = 0
Query:    1 MCVFPPGVYPPLYVSVWLTLDDCDAVNGCLEVYPQAWNRPRLQSPGDEDDANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYSVDVIRATPSDPRPLSLAVPCLRSR 115
            MCVF PG  PP+YVSVWL LDDCDAVNGCLEVYPQA ++ R Q+P +EDDA VVCLPAKAGDAVVFLSNLWHRSGPN+T+  RRVFYAQY +D IRA PSDPRPLSLAVPC+ SR
Sbjct:    1 MCVFAPGARPPVYVSVWLALDDCDAVNGCLEVYPQARDQTRQQTPSEEDDACVVCLPAKAGDAVVFLSNLWHRSGPNQTDNPRRVFYAQYCLDAIRAAPSDPRPLSLAVPCMPSR 115          
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: A0A6H5KSK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK1_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.470e-60
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0
Query:    1 MCVFPPGVYPPLYVSVWLTLDDCDAVNGCLEVYPQAWNRPRLQSPGDEDDANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYSVDVIRATPSDPRPLSLAVPCLRSR 115
            MCVF PG  PP+YVSVWL LDDCDAVNGCLEVYPQA N+ R Q+P +EDDA+VVCLPAKAGDAVVFLSNLWHRSGPN+T+  RRVFYAQY +D IRA PSDPRPLSLAVPC+ SR
Sbjct:  212 MCVFAPGAGPPVYVSVWLALDDCDAVNGCLEVYPQARNQTRQQTPSEEDDASVVCLPAKAGDAVVFLSNLWHRSGPNQTDNPRRVFYAQYCLDAIRAAPSDPRPLSLAVPCMPSR 326          
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: H3GIQ3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIQ3_PHYRM)

HSP 1 Score: 87.0 bits (214), Expect = 3.490e-18
Identity = 51/123 (41.46%), Postives = 62/123 (50.41%), Query Frame = 0
Query:    1 MCVFPPGVYPPLYVSVWLTLDDCDAVNGCLEVYPQAWNRPRLQSPGDEDDANVVCL--------PAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYSVDVIRATPSDPRPLSLAVPCLRSR 115
            MCV    + P  YVS W  LDD  + NG L+          L   GD  +  V  L        PAKAGD + FLSN+WH S  N ++  RR FYAQYS + I A P +  PLS A+PC   R
Sbjct:  163 MCVDRETIRP--YVSAWCALDDVSSANGALQFVS-------LDESGDLGEETVEKLQLRACAPVPAKAGDVLFFLSNVWHCSSSNESDAPRRAFYAQYSSEKITARPKEVTPLSFAIPCNSKR 276          
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: A0A7R9TJ11_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TJ11_MICPS)

HSP 1 Score: 76.6 bits (187), Expect = 5.310e-14
Identity = 40/90 (44.44%), Postives = 48/90 (53.33%), Query Frame = 0
Query:    6 PGVYPPLYVSVWLTLDDCDAVNGCLEVYPQAWNRPRLQSPGDEDDANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYSVDVI 95
            P      YVS+W  LD  D  NG L + P           G       V + A+AGD V+F S+LWH SGPNR+ R RRVFYAQYS + I
Sbjct:  312 PDARKQKYVSLWCPLDAVDERNGSLVLRPSERPSHHDDGSGRARGRKDVTVRAEAGDVVIFSSDLWHASGPNRSRRERRVFYAQYSGEPI 401          
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: C1N1N3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N1N3_MICPC)

HSP 1 Score: 74.7 bits (182), Expect = 2.570e-13
Identity = 38/85 (44.71%), Postives = 45/85 (52.94%), Query Frame = 0
Query:    6 PGVYPPLYVSVWLTLDDCDAVNGCLEVYPQAWNRPRLQSPGDEDDANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQY 90
            P      YVS+W  LD  D  NG L + P           G       V + A+AGD V+F S+LWH SGPNR+ R RRVFYAQY
Sbjct:  325 PDARKQKYVSLWCPLDAVDERNGSLVLRPSERPSHHDDGSGRARGRKDVTVRAEAGDVVIFSSDLWHASGPNRSRRERRVFYAQY 409          
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: A0A7Y2DMU4_9ACTN (Phytanoyl-CoA dioxygenase family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DMU4_9ACTN)

HSP 1 Score: 67.4 bits (163), Expect = 3.450e-11
Identity = 36/97 (37.11%), Postives = 50/97 (51.55%), Query Frame = 0
Query:   13 YVSVWLTLDDCDAVNGCLEVYPQAW--------------NRPRLQSPGDEDDANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYSVDVI 95
            Y+S+W+++D     NGC+ V P++               N+ R+   GD+    V C P   G  V F S   HRSGPN T+RARR +  QYSV+ I
Sbjct:  126 YLSLWISIDAATEANGCVPVLPRSLDGSARVVPHRFDPVNKERVGYDGDDPGIAVECPP---GSIVAFSSLTMHRSGPNTTDRARRAYLCQYSVEPI 219          
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: A0A6L7KQH9_9RHOB (Phytanoyl-CoA dioxygenase family protein n=1 Tax=Boseongicola sp. SB0667_bin_21 TaxID=2604846 RepID=A0A6L7KQH9_9RHOB)

HSP 1 Score: 67.4 bits (163), Expect = 4.070e-11
Identity = 38/98 (38.78%), Postives = 50/98 (51.02%), Query Frame = 0
Query:   13 YVSVWLTLDDCDAVNGCLEVYPQ-----------AWNRPRLQSPG---DEDDANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYSVDVIR 96
            Y++VW+ LDD    NGC+ + P+            W     +  G   D+    +VC    AG  V F S   HRSGPNRT+R RR + AQYSV+ IR
Sbjct:  137 YLTVWIALDDTTEENGCVYLLPRDLETDPGIDEHEWQEDSKELNGYFGDDPGRPMVC---PAGTVVAFSSRTLHRSGPNRTDRPRRAYIAQYSVEPIR 231          
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: A0A239JF92_9PROT (Phytanoyl-CoA dioxygenase (PhyH) n=1 Tax=Azospirillum sp. RU38E TaxID=1907313 RepID=A0A239JF92_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 5.980e-11
Identity = 46/124 (37.10%), Postives = 60/124 (48.39%), Query Frame = 0
Query:    6 PGVYPPLYVSVWLTLDDCDAVNGCLEVYPQAWNR---------PRLQSPGDED------DANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYSVDVIRATPSDPRPLSLAVPCLRS 114
            P  + P Y++ W  LDD    NG + + P  ++R         P L+ PG  D      D   V + A AG  V F S L H SGPN ++R RRV+ AQYS +VI   P        A+P LRS
Sbjct:  128 PADHAP-YLTCWCPLDDATLENGTIRLLP--FSRVPASRDGILPHLRQPGTNDLVGWTGDDQGVVIEAPAGSVVAFSSRLLHASGPNHSDRMRRVYLAQYSPEVI-LNPGTRHLRRDAIPLLRS 247          
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: A0A6L7LI54_9RHOB (Phytanoyl-CoA dioxygenase family protein n=6 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L7LI54_9RHOB)

HSP 1 Score: 65.9 bits (159), Expect = 1.550e-10
Identity = 37/98 (37.76%), Postives = 49/98 (50.00%), Query Frame = 0
Query:   13 YVSVWLTLDDCDAVNGCLEVYPQ-----------AWNRPRLQSPG---DEDDANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYSVDVIR 96
            Y++VW+ LDD    NGC+ + P+            W     +  G   D+    +VC    AG  V F S   HRSGPN T+R RR + AQYSV+ IR
Sbjct:  139 YLTVWMALDDTTEENGCVHLLPRNLATDPGIDAHEWQEDSKELNGYFGDDPGQPMVC---PAGSVVAFSSRTLHRSGPNGTDRPRRAYIAQYSVEPIR 233          
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Match: UPI0004180353 (phytanoyl-CoA dioxygenase family protein n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004180353)

HSP 1 Score: 65.5 bits (158), Expect = 3.450e-10
Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0
Query:    9 YPPLYVSVWLTLDDCDAVNGCLEVYPQA--WNRPRLQSPGDEDDANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYS 91
            +P +  +VWL LDD  A NG   V P +  + +    S G  DD  V+  PA  G   ++LSN WHRSGPN T+R RR     Y+
Sbjct:  193 FPLMVQNVWL-LDDFTAHNGATRVVPGSHRFRKAPPWSEGQRDDERVLTAPA--GSVAIWLSNTWHRSGPNETDRPRRAILCNYN 274          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13217.5884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI8_ECTSI1.120e-6179.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSK1_9PHAE1.470e-6080.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3GIQ3_PHYRM3.490e-1841.46Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A7R9TJ11_MICPS5.310e-1444.44Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
C1N1N3_MICPC2.570e-1344.71Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7Y2DMU4_9ACTN3.450e-1137.11Phytanoyl-CoA dioxygenase family protein n=1 Tax=A... [more]
A0A6L7KQH9_9RHOB4.070e-1138.78Phytanoyl-CoA dioxygenase family protein n=1 Tax=B... [more]
A0A239JF92_9PROT5.980e-1137.10Phytanoyl-CoA dioxygenase (PhyH) n=1 Tax=Azospiril... [more]
A0A6L7LI54_9RHOB1.550e-1037.76Phytanoyl-CoA dioxygenase family protein n=6 Tax=u... [more]
UPI00041803533.450e-1041.18phytanoyl-CoA dioxygenase family protein n=1 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.620coord: 2..107
e-value: 3.7E-26
score: 93.8
NoneNo IPR availablePANTHERPTHR20883:SF34coord: 13..110
NoneNo IPR availablePANTHERPTHR20883PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1coord: 13..110
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 8..97
IPR008775Phytanoyl-CoA dioxygenasePFAMPF05721PhyHcoord: 9..85
e-value: 1.8E-16
score: 61.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13217contigM-pyrifera_M_contig13217:5254..8514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13217.5884.1mRNA_M-pyrifera_M_contig13217.5884.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13217 5254..8535 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13217.5884.1 ID=prot_M-pyrifera_M_contig13217.5884.1|Name=mRNA_M-pyrifera_M_contig13217.5884.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
MCVFPPGVYPPLYVSVWLTLDDCDAVNGCLEVYPQAWNRPRLQSPGDEDD
ANVVCLPAKAGDAVVFLSNLWHRSGPNRTERARRVFYAQYSVDVIRATPS
DPRPLSLAVPCLRSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase