prot_M-pyrifera_M_contig1319.5874.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1319.5874.1
Unique Nameprot_M-pyrifera_M_contig1319.5874.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length304
Homology
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 1.030e-107
Identity = 214/310 (69.03%), Postives = 245/310 (79.03%), Query Frame = 0
Query:    1 CDGLIPQASNPLLVGGDSLNIRAHGGKLVIRDTKIFSWDIFAGTHDFDPFDGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFN----YGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYESNDCLVYDNKFYFNKRGIRWSNGANFNDVYSNR--IKTDESGDFAIYM 304
            C+ L+  A N  + G DSLNIRAHGG LV+RDTKIFSWDI  GT+D +  +GR ++SA+TE ITGR+ D CP D +AGE GYSTGQA    GVA MDI+ SELAYLGYS SESYG+SYKARGLCKTL N+DIFDDDQ F     Y VYGDI  S +H+NWFGHYS+GHQGG+W +N+V DN GYGFDPHDDSDH+EI GNKV+ NG HGIIASKRC    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +DC VYDN F  N RG+RWSNGAN N+VYSN   + + +  D+AIY+
Sbjct:  116 CETLL-MAGNDDITGSDSLNIRAHGGNLVVRDTKIFSWDITTGTYDTNTGNGRPYLSAITEFITGRDEDLCPSDTQAGEDGYSTGQAKEQMGVARMDIYDSELAYLGYSESESYGISYKARGLCKTLENVDIFDDDQDFPVYGAYAVYGDIYRSKIHNNWFGHYSYGHQGGKWIDNDVYDNVGYGFDPHDDSDHLEIRGNKVWGNGYHGIIASKRCTDITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDCDVYDNVFENNPRGVRWSNGANRNNVYSNTMTVGSGDDDDYAIYL 424          
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: A0A6H5JYM5_9PHAE (MEP15 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM5_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 8.760e-84
Identity = 163/286 (56.99%), Postives = 189/286 (66.08%), Query Frame = 0
Query:   21 IRAHGGKLVIRDTKIFSWDIFAGTHDFDPFDGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFNYGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYESNDCLVYDNKFYFNKRGIRWSNGANFNDVYSNRI--KTDESGDFAIYM 304
            I AHGG L IR TKIFSWD+    +D DP DGR+++SA+TE ITGR  DTCPDD  +     S GQA  D G A MDI  SE+ YLGY  SE+YG+SYKARGLCK   NLDIFDDD   N GV GDI +S LHHNWFGHYS+GH GG+W  N V+DN+GYGFDPHDDSD ++I GN+VYNNG HGII +             XXXXXXXX                XXXXXXXX  +E++D  VY N    NK G+RWSNGAN N V+ N I  + D+ GDFA YM
Sbjct:  143 ITAHGGNLDIRYTKIFSWDLKNEDYDTDPSDGRSYLSAVTEKITGRTKDTCPDDSSS-----SNGQAKEDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDNSNLDIFDDDNGLNVGVTGDIYDSDLHHNWFGHYSWGHDGGKWQYNTVHDNYGYGFDPHDDSDKLKIVGNEVYNNGWHGIIYT------YGLLRMVXXXXXXXXMLHRSCDRANVRENYAXXXXXXXXALFETSDSKVYKNTLENNKYGVRWSNGANNNRVWKNDIVVEADQGGDFAFYM 417          
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: D7FWK3_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK3_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 2.080e-72
Identity = 119/186 (63.98%), Postives = 136/186 (73.12%), Query Frame = 0
Query:   21 IRAHGGKLVIRDTKIFSWDIFAGTHDFDPFDGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFNYGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGI 206
            I AHGG L IR TKIFSWD+    +D +P DGR+++SA+TE ITGR  DTCPDD  +     S GQA  D G A MDI  SE+ YLGY  SE+YG+SYKARGLCK   NLDIFDDD   N GV GDI  S LHHNWFGHYS+GH GG+W  N V+DN+GYGFDPHDDSD + I GN+VYNNG HGI
Sbjct:  176 ITAHGGNLDIRYTKIFSWDLENEDYDTEPSDGRSYLSAVTEKITGRTKDTCPDDSSS-----SNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYRSDLHHNWFGHYSWGHDGGKWQYNTVHDNYGYGFDPHDDSDKLRIIGNEVYNNGWHGI 356          
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 1.940e-53
Identity = 143/219 (65.30%), Postives = 158/219 (72.15%), Query Frame = 0
Query:   92 GVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFN----YGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYESNDCLVYDNKFYFNKRGIRWSNGANFNDVYSNRIK--TDESGDFAIYM 304
            GVA MDI+ SELAYLGYS SESYGVSYKARGLCKTL N+DIFDDDQ F     Y VYGDI  S +H+NWFGHYS+GHQGG+W +N+V DN GYGFDPHDDSDH+EI GNK                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +DC VYDN F  N RG+RWSNGAN N+VYSN I   + +  D+AIY 
Sbjct:    2 GVARMDIYDSELAYLGYSESESYGVSYKARGLCKTLENVDIFDDDQDFPVYGAYAVYGDIYRSKIHNNWFGHYSYGHQGGKWIDNDVYDNVGYGFDPHDDSDHLEIRGNKXX------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDCDVYDNVFEDNPRGVRWSNGANRNNVYSNTIAVGSGDDDDYAIYF 196          
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.640e-52
Identity = 98/198 (49.49%), Postives = 123/198 (62.12%), Query Frame = 0
Query:   15 GGDSLNIRAHGGKLVIRDTKIFSWDIFAGTHDFDPFDGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFNYGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGIIASKRC 212
            G D   IR HGG L   DT + SWD+          DGR+ I  ++E++TG   DTC               A+ + G   MDI  SE+ YLGY ASE+YG+++K RG C  L N D+FDD       VYGD+  S +HH ++G YSFGHQGG WTNN ++DN  YGFDPHDDSD++ I+GNKVYNN +HGIIASKRC
Sbjct:   88 GSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGE--DTC---------------AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDD-----VNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRC 263          
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.790e-51
Identity = 99/194 (51.03%), Postives = 126/194 (64.95%), Query Frame = 0
Query:   19 LNIRAHGGKLVIRDTKIFSWDIFAGTHDFDPFDGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFNYGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGIIASKRC 212
            +N+RAHGG L    TK+FSWD    + D D  DGR++ISA++EIIT  E +TC             G A    G A MDI SSE+ YLGY  SESYG+++K RG C+   N ++FDD       VYG++ +S +HH  FG Y++GHQ G W  N+++DN GYGFDPHDDSD + I  N+VYNNG HGIIASKRC
Sbjct:  141 INLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITD-EDETCE------------GNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDD-----VNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRC 316          
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.670e-50
Identity = 99/194 (51.03%), Postives = 126/194 (64.95%), Query Frame = 0
Query:   19 LNIRAHGGKLVIRDTKIFSWDIFAGTHDFDPFDGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFNYGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGIIASKRC 212
            +N+RAHGG L    TK+FSWD    + D D  DGR++ISA++EIIT  E +TC             G A    G A MDI SSE+ YLGY  SESYG+++K RG C+   N ++FDD       VYG++ +S +HH  FG Y++GHQ G W  N+++DN GYGFDPHDDSD + I  N+VYNNG HGIIASKRC
Sbjct:  141 INLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITD-EDETCE------------GNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDD-----VNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRC 316          
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 6.890e-50
Identity = 98/194 (50.52%), Postives = 126/194 (64.95%), Query Frame = 0
Query:   19 LNIRAHGGKLVIRDTKIFSWDIFAGTHDFDPFDGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFNYGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGIIASKRC 212
            +N+RAHGG L    TK+FSWD    + D D  DGR++ISA++EI+T  E +TC             G A    G A MDI +SE+ YLG+  SESYG+++K RG CK   N +IFDD       VYG++ +S +HH  FG Y++GHQ G W  N+++DN GYGFDPHDDSD + I  N+VYNNG HGIIASKRC
Sbjct:  145 INLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTD-EDETCE------------GNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDD-----VNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRC 320          
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 4.040e-49
Identity = 95/194 (48.97%), Postives = 125/194 (64.43%), Query Frame = 0
Query:   19 LNIRAHGGKLVIRDTKIFSWDIFAGTHDFDPFDGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFNYGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGIIASKRC 212
            +N+RAHGG L    TK+F+WD      D D  DGR+++SA++E+IT  +  TC             G+A  + G A MDI  SE+ YLGY  SESYG+++K RG C    N D+F+D       VYG+I +S +HHN FG Y++GHQ G W  N+++DN GYGFDPHDDSD + I  N+VY+NG HGIIASKRC
Sbjct:  138 INLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITD-DSQTC------------NGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFED-----VNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRC 313          
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 179 bits (453), Expect = 7.910e-49
Identity = 95/196 (48.47%), Postives = 127/196 (64.80%), Query Frame = 0
Query:   17 DSLNIRAHGGKLVIRDTKIFSWDIFAGTHDFDPFDGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFSSELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFNYGVYGDIDNSHLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYNNGDHGIIASKRC 212
            D +N+RAHGG L    TK+F+WD        D   GR++ISA++E+IT  +   C             G+A  + G A MDI  SE+AYLGY  SESYG+++K RGLC+ L NL++FD        VYG+I +S +HHN+FG Y++GH+ G W  N+++ N  YGFDPHDDSD + I  N+VYNNG+HGIIASKRC
Sbjct:  136 DFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSK-QKCD------------GRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFD-----AVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRC 313          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1319.5874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUS5_9PHAE1.030e-10769.03MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JYM5_9PHAE8.760e-8456.99MEP15 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FWK3_ECTSI2.080e-7263.98Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G651_ECTSI1.940e-5365.30Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
D7FRR8_ECTSI1.640e-5249.49Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI1.790e-5151.03Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI1.670e-5051.03Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI6.890e-5050.52Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE4.040e-4948.97Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
A8CEP1_SACJA7.910e-4948.47Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 212..234
e-value: 0.11
score: 21.6
coord: 259..280
e-value: 46.0
score: 12.9
coord: 236..258
e-value: 1800.0
score: 5.5
coord: 188..210
e-value: 1.2
score: 18.1
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 187..296
e-value: 1.5E-13
score: 50.9
NoneNo IPR availablePANTHERPTHR22990:SF27coord: 170..235
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 170..235
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 141..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1319contigM-pyrifera_M_contig1319:19145..27319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1319.5874.1mRNA_M-pyrifera_M_contig1319.5874.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1319 19145..27319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1319.5874.1 ID=prot_M-pyrifera_M_contig1319.5874.1|Name=mRNA_M-pyrifera_M_contig1319.5874.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=304bp
CDGLIPQASNPLLVGGDSLNIRAHGGKLVIRDTKIFSWDIFAGTHDFDPF
DGRAHISALTEIITGREIDTCPDDVRAGEPGYSTGQALYDKGVATMDIFS
SELAYLGYSASESYGVSYKARGLCKTLVNLDIFDDDQPFNYGVYGDIDNS
HLHHNWFGHYSFGHQGGRWTNNEVNDNFGYGFDPHDDSDHVEISGNKVYN
NGDHGIIASKRCTDIIISNNEVYNNAGNGIMLHRSCNRAKLFDNYSHDNE
DAGLALYESNDCLVYDNKFYFNKRGIRWSNGANFNDVYSNRIKTDESGDF
AIYM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence