prot_M-pyrifera_M_contig1318.5871.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1318.5871.1
Unique Nameprot_M-pyrifera_M_contig1318.5871.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length90
Homology
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BLAST of mRNA_M-pyrifera_M_contig1318.5871.1 vs. uniprot
Match: D7FUT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT6_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.550e-13
Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 0 
Query:    1 MHISGAAFVRIAPGGLVFLQNLHWCDTGEAIEQDGGAVECLPDQLLDNLHRVVTATHLARCVVNSAISEAVD 72
            MH +GA FVR+APGGLV L N+HW D+GE  +Q  G    L  +L D L+ +V  TH A+    S ISEAVD
Sbjct: 2070 MHRTGAVFVRVAPGGLVLLPNVHWRDSGEHADQPPGRNRQLQRRLRDTLNNLVVVTHNAQAAATSVISEAVD 2141
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1318.5871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUT6_ECTSI1.550e-1351.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1318contigM-pyrifera_M_contig1318:24468..25280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1318.5871.1mRNA_M-pyrifera_M_contig1318.5871.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1318 24434..26386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1318.5871.1 ID=prot_M-pyrifera_M_contig1318.5871.1|Name=mRNA_M-pyrifera_M_contig1318.5871.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
MHISGAAFVRIAPGGLVFLQNLHWCDTGEAIEQDGGAVECLPDQLLDNLH
RVVTATHLARCVVNSAISEAVDAALTKQRASHVNSAASF*
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