prot_M-pyrifera_M_contig13115.5851.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13115.5851.1
Unique Nameprot_M-pyrifera_M_contig13115.5851.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length463
Homology
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: D8LBK0_ECTSI (Bromodomain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK0_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 1.320e-102
Identity = 251/511 (49.12%), Postives = 278/511 (54.40%), Query Frame = 0
Query:    1 MVSRPINLLTWPEVAGDALVALANHRAHPEMRTSEMAALLSVRPSGWLARCGDMVAIIISRPLAAAFVRPVDPALVPGYSDVVSRPMDLSTVRRRLWSRRYQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLSLLTESLYEAWVLQPERRRDAESMKEAGLAEGGPPHGDAPVTVAATTGTAAXXXXXXXXXXXXXXXXXXXNRALFGAPPVLGVAIKTE---------AGS-----------------QPPAGAAPVKATASAXXXXXXXXXXXXXXXXXPEAGXXXNSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAGQ-AKHEEEAVKPNGYLGGXXXXXXXXXXXGSGQPELDGGQP-FEAPGDDESAVQGLSLVPAD---------PLDVAFGGGICCLCGGGASVSGGSDLLD----------------------GASGG--WVLVPPELKSLPAKLLPRFTDLRSGGGESXXXXXXXXXXXEVTPEEGESCRSS 450
            +  RP+NLLTWPEVAGDALVALANHRAHPEMRTSEMAALLSVRPSGWLARCGDMVAI+ISRPLAAAFVRPVDPA VPGY+DVVS+PMDLSTVRRRLWSRRYQWHQ+VVDDLRLVWSNA  FNQE TDFWHAADSL+LLTESLYE+WVLQPERRRDAESMKEAGL        DAP   A+ T    X                          P +G  +K E         AG                   P  GAA   AT +A                   +     +          XXXXXXXXX               V  + A   E A    G  GG  XX       G      DG +P FEAPGDDE+ V+ L+LVPA            DV    G+CCLCGG A +S GSD +D                      GA GG  WV++PPELK+LPAKLLPRF DLR G               + TPEEG +  SS
Sbjct: 1041 LAQRPVNLLTWPEVAGDALVALANHRAHPEMRTSEMAALLSVRPSGWLARCGDMVAILISRPLAAAFVRPVDPAQVPGYADVVSKPMDLSTVRRRLWSRRYQWHQEVVDDLRLVWSNAKVFNQENTDFWHAADSLALLTESLYESWVLQPERRRDAESMKEAGLGVV-----DAPTPAASATAXXXXPGATT---------------------PAMGAQVKQEEHTTPGTATAGETXXXXXXXXXXXXXEDGHPAVGAAGTDATGAAMPSTPQAAASGVVPETPLSSSSPAAAVGTDISAASTXXXXXXXXXGMDVDQSGAGDADVLVVKETASARERAAVEIG--GGGDXXSESGDLDGXXS---DGEEPQFEAPGDDEAPVRELALVPAGIERHWTTTGADDVKEAAGVCCLCGG-AELSAGSDPVDSLSSSGAPLLANGGEETKEGEGGARGGEMWVIIPPELKTLPAKLLPRFADLRRGKAADVV---------KTTPEEGAATLSS 1510          
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: A0A6H5KKJ2_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ2_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 2.510e-61
Identity = 117/167 (70.06%), Postives = 125/167 (74.85%), Query Frame = 0
Query:    1 MVSRPINLLTWPEVAGDALVALANHRAHPEMRTSEMAALLSVRPSGWLA---RCGDMVAIIISRPLAAAFVRPVDPALVPGYSDVVSRPMDLSTVRRRLWSRRYQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLSLLTESLYEAWVLQPERRRDAESMKEAGL 164
            +  RP+NLLTWPEVAGDALVAL NHRAHPEMRTSEMAALLSVRPSGWLA   RCGDMVAI+ISRPLAAAFVRPVDPA VPGY+DVVS+PMDL                                  E TD+WHAADSL+LLTESLYE+WVLQPERRRDAESMKEAGL
Sbjct:   77 LAQRPVNLLTWPEVAGDALVALVNHRAHPEMRTSEMAALLSVRPSGWLASIIRCGDMVAILISRPLAAAFVRPVDPAQVPGYADVVSKPMDL----------------------------------ENTDYWHAADSLALLTESLYESWVLQPERRRDAESMKEAGL 209          
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: A0A7J6M8E4_PERCH (Bromo domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6M8E4_PERCH)

HSP 1 Score: 68.6 bits (166), Expect = 5.280e-9
Identity = 43/136 (31.62%), Postives = 64/136 (47.06%), Query Frame = 0
Query:   58 IISRPLAAAFVRPVDPALVPGYSDVVSRPMDLSTVRRRLWSRR--------------YQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLSLLTESLYEAWVL-------------QPERRRDAESMKEAGLAE 166
            I   P A  F+ PVD  + P Y D+V RPMDLST+  +L  RR              YQ+ Q V +DL  +W N M +N+   D + A+  +  ++ +L + WV+              P  R  AE+++E   AE
Sbjct:   32 IREEPRAEYFLTPVDTKVYPTYKDIVKRPMDLSTMEIKLKGRRRGRKPRIPKPPIEKYQFVQDVFNDLEQIWINCMTYNRPDCDAYSASQEMQTISRALVDDWVIANIPNARMKELEPSPSVRLTAEALREVSEAE 167          
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: A0A388K542_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K542_CHABU)

HSP 1 Score: 68.9 bits (167), Expect = 6.400e-9
Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 0
Query:   30 EMRTSEMAALLSVRPSGWLARCGDMVAIIISRPLAAAFVRPVDPALVPG-----YSDVVSRPMDLSTVRRRLWSR---RYQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLSLLTESLYEAW--VLQPE------RRRDAESM 159
            E+  ++  A  + R    + + G+++  ++    A  F++PVD   V G     Y DV+ +PMDL T+R R+ +    RY+  QQ+ DD+RLV+SNAM +NQE TD +  A +LS   E   E W   L+P+      RRRD E++
Sbjct:  119 EIDKAKQEAARAKRMQDLIRQSGNILRQLMQHKWAWPFLKPVD---VEGLGLHDYFDVIKKPMDLGTIRDRMDATDGTRYEHPQQICDDIRLVFSNAMTYNQEGTDVYVMARTLS---EKFEEKWRTSLEPKLNEEANRRRDEEAL 258          
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: C5LUI6_PERM5 (Bromodomain-containing protein, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LUI6_PERM5)

HSP 1 Score: 67.8 bits (164), Expect = 6.910e-9
Identity = 47/144 (32.64%), Postives = 65/144 (45.14%), Query Frame = 0
Query:   62 PLAAAFVRPVDPALVPGYSDVVSRPMDLSTVRRRLWSRR---------------YQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLSLLTESLYEAWVL-------------QPERRRDAESMKEAGLAEGGPPHGDAPVT 177
            P A  F+ PVD    P Y DVV RPMDLST+  ++  +R               YQ+ Q V +DL  +W N M FN+   D + A+  +     +L + WV+              P  R  AE ++E   AEG P  G +P T
Sbjct:   36 PRAEYFLTPVDQKAYPHYKDVVKRPMDLSTMEMKVKGQRPRXXXXXVPRPTIEKYQYVQDVFNDLEQIWINCMTFNRPDCDAYAASVEMQATARALVDDWVVANIPNARMKEIDPSPTVRLTAEVLREVSEAEGEPEAGVSPST 179          
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: UPI000D73D397 (bromodomain adjacent to zinc finger domain protein 1A-like isoform X1 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D73D397)

HSP 1 Score: 69.7 bits (169), Expect = 7.460e-9
Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = 0
Query:   51 CGDMVAIIISRPLAAAFVRPVDPALVPGYSDVVSRPMDLSTVRRRLWSRRYQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLS 136
            C +++  +I    A  F++PVD  LVP Y DV++RPMDLST+R  + S RY    +++ D+RL++SN + +N  TT  + A  SL+
Sbjct: 1389 CEELLQELIRHEDAWPFLKPVDKRLVPDYYDVITRPMDLSTIRNGVHSFRYSTPGELLADVRLIFSNCVEYNARTTPEYRAGQSLA 1474          
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: A0A2T7P044_POMCA (Protein kintoun n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7P044_POMCA)

HSP 1 Score: 69.7 bits (169), Expect = 8.070e-9
Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = 0
Query:   51 CGDMVAIIISRPLAAAFVRPVDPALVPGYSDVVSRPMDLSTVRRRLWSRRYQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLS 136
            C +++  +I    A  F++PVD  LVP Y DV++RPMDLST+R  + S RY    +++ D+RL++SN + +N  TT  + A  SL+
Sbjct: 2368 CEELLQELIRHEDAWPFLKPVDKRLVPDYYDVITRPMDLSTIRNGVHSFRYSTPGELLADVRLIFSNCVEYNARTTPEYRAGQSLA 2453          
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: M2PIR6_CERS8 (Bromo domain-containing protein n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2PIR6_CERS8)

HSP 1 Score: 68.9 bits (167), Expect = 1.050e-8
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   65 AAFVRPVDPALVPGYSDVVSRPMDLSTVRRRLWSRRYQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLSLLTESLYEAWVLQ 149
            A F++PVD + VPGY+D+V RPMDL T+ +++   +Y+  ++  DDLRLV +NA  FN   T F+  AD +        EAW L+
Sbjct:   87 AFFLQPVDVSQVPGYADIVKRPMDLGTMTKKVEKGKYRSLEEFADDLRLVTTNAKMFNPPGTIFYTEADKI--------EAWALE 163          
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: A0A7S0F5U8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F5U8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.520e-8
Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = 0
Query:   54 MVAIIISRPLAAAFVRPVD--PALVPGYSDVVSRPMDLSTVRRRLWSRRYQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLSLLTESLYEAWVLQPERRRDAESMK 160
            +V  +++R  AA F  PVD     +  Y  ++ +PMDL TV++R+  R+Y       +D+RLVW+N M +NQ+ +DF+  A  LS L E  +  +V   +   D+ + K
Sbjct:   15 IVTAVMARADAAPFREPVDWKGLGIMDYPQIIKKPMDLGTVKKRISGRKYNTVFDAANDVRLVWTNCMTYNQDGSDFFVIAKRLSKLWEDKFAKFVRDQKLSEDSGTTK 123          
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Match: A2FR76_TRIVA (Bromodomain containing protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2FR76_TRIVA)

HSP 1 Score: 63.9 bits (154), Expect = 3.670e-8
Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 0
Query:   51 CGDMVAIIISRPLAAAFVRPVDPALVPGYSDVVSRPMDLSTVRRRLWSRRYQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLSLLTESLYEAWVLQPERRRDAESMKEAGL 164
            C DM+  I S P+A  F+  VDP  +P Y  VVS+PMD+ST++ +L  ++Y        DL+L+  N+  +N  T    H A  L +    +++ + ++ E  +D+   K A L
Sbjct:    9 CTDMINKIRSWPIAIPFLEKVDPEDLPDYKQVVSKPMDISTMKSKLEKKKYTSINDFFKDLQLIHDNSSLYNGPTHMLTHMAKDLLM---DVHQRYAIRAENEKDSWLFKLAQL 119          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13115.5851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBK0_ECTSI1.320e-10249.12Bromodomain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KKJ2_9PHAE2.510e-6170.06Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7J6M8E4_PERCH5.280e-931.62Bromo domain-containing protein n=1 Tax=Perkinsus ... [more]
A0A388K542_CHABU6.400e-935.62Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
C5LUI6_PERM56.910e-932.64Bromodomain-containing protein, putative n=2 Tax=P... [more]
UPI000D73D3977.460e-940.70bromodomain adjacent to zinc finger domain protein... [more]
A0A2T7P044_POMCA8.070e-940.70Protein kintoun n=1 Tax=Pomacea canaliculata TaxID... [more]
M2PIR6_CERS81.050e-842.35Bromo domain-containing protein n=1 Tax=Ceriporiop... [more]
A0A7S0F5U8_9STRA1.520e-833.94Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A2FR76_TRIVA3.670e-832.46Bromodomain containing protein n=1 Tax=Trichomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 76..92
score: 42.97
coord: 92..110
score: 24.26
coord: 110..129
score: 30.54
coord: 62..75
score: 32.14
IPR001487BromodomainSMARTSM00297bromo_6coord: 40..148
e-value: 5.0E-15
score: 65.9
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 57..133
e-value: 4.9E-20
score: 71.4
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 59..129
score: 16.846
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 24..161
e-value: 4.3E-26
score: 93.3
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 30..146
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 67..254
NoneNo IPR availablePANTHERPTHR22881:SF11SWI/SNF NUCLEOSOME REMODELING COMPLEX COMPONENTcoord: 67..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13115contigM-pyrifera_M_contig13115:664..8729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13115.5851.1mRNA_M-pyrifera_M_contig13115.5851.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13115 661..8729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13115.5851.1 ID=prot_M-pyrifera_M_contig13115.5851.1|Name=mRNA_M-pyrifera_M_contig13115.5851.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=463bp
MVSRPINLLTWPEVAGDALVALANHRAHPEMRTSEMAALLSVRPSGWLAR
CGDMVAIIISRPLAAAFVRPVDPALVPGYSDVVSRPMDLSTVRRRLWSRR
YQWHQQVVDDLRLVWSNAMAFNQETTDFWHAADSLSLLTESLYEAWVLQP
ERRRDAESMKEAGLAEGGPPHGDAPVTVAATTGTAAATADTTTGANTNAN
INSNANRALFGAPPVLGVAIKTEAGSQPPAGAAPVKATASAANADASEAT
AAAMVPEAPEAGATANSTSMGVVVGSGGGGGGGGGSEVDGGDGSGARGAG
AVAGQAKHEEEAVKPNGYLGGGGDGGVGGGSEGSGQPELDGGQPFEAPGD
DESAVQGLSLVPADPLDVAFGGGICCLCGGGASVSGGSDLLDGASGGWVL
VPPELKSLPAKLLPRFTDLRSGGGESCGGGGGGGSVVEVTPEEGESCRSS
SGSSSSGSRGSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf