prot_M-pyrifera_M_contig13092.5845.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13092.5845.1
Unique Nameprot_M-pyrifera_M_contig13092.5845.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length747
Homology
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BLAST of mRNA_M-pyrifera_M_contig13092.5845.1 vs. uniprot
Match: D7FR27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR27_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 7.020e-107
Identity = 344/765 (44.97%), Postives = 385/765 (50.33%), Query Frame = 0 
Query:    1 AGLQLSNLLKASASLHTVQASGNYLGDRGLAALCGAFCYLNPARVLSLDVSXXXXXXXXAQWLCKGISALCRNENRSADPGAGGGIRDLRLRGNNITHSGAKDLAKLLSEDRCARQLRELDLSMNTITADGFRPLALSLRGCRELVRIDVGGCRLGPGGVEAAAELIAAAGPKLTTVILTPKAEFADRVLGDRGGLAVALRQSLQRLADSLRFAGTVVEVSLGAFLRGDPSAAASIEETLRENRERAGVGAGGERGXXXXXXXXXXXRRGDAGAGVASTPLSSRTTEKTRSGAPKRGTPSSSSRTRGDTAGATPTASXXXXXXXXPPTHRAGSAAAXXSTPARSTPSGSKDSTRHGVRGTGIERPKAGVXXXXP--GTVERTRRGGSARATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANVAPTPRRRMHQGEELDSIDGFSPTVTAR--VPXXXXXXXXXXXXXXRRPLPLSAVAGVSQTHASRNAAPSPGGPLADGYPAGGGGHTAGPGAGMAATGSGAEGGRHLESIADVVSKVMGDTEAMV-AQESPLCVAPSTWQWQADTAAASAEAREGGGGGELYPQVIADEA--------AGVRPPSPRAALAASQSLHPSDKPRLATSGAVAGAADGERSGRRERELADGMASLALADERRP---RSGSHETALEVSSGGSSGQQ--MVTIAEAGRILGPLVAQEVEKETKKIEIRMQ 747
            AGLQLSNLLKASASLHTV A GNYLGDRGLAALCGAFCYL PARVLSLDVS        AQWLCKGISALCRN+  +A  G+G GIRDLRLRGNNITH+GAK+LA +LSE RCAR LRELDLSMNTITADGFRPLA+SLRGCRELVR+DV GCRLGPGGV+A A+LIAA+GPKLT V+LTPKAEFADRVLGDRGGLAVALRQSLQRLADSL FAG+VVE                            G+G                                                                                                       + G RGTGIERPKAG+       GT ER       +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 + +    P RR+HQGEELDSI+GF+    A   +P        XXXXXX                     A  PG                 P AG+ A+ SG      +ESIADVVSKVMGDT A+     +P  VAPSTW W  ++   +  A  G                       + V P S                     S + A  +  E       E+A GM SLAL+D  R     S    TA+EVS          +VT+ +A R+L PLVAQEVEKETKKIEIRMQ
Sbjct:  135 AGLQLSNLLKASASLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDAA--GSGSGIRDLRLRGNNITHTGAKELATILSEGRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLTAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVE----------------------------GIG-------------------------------------------------------------------------------------------------------KSGARGTGIERPKAGLERQKAAGGTAER-------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGKPETGQPRQPVVAGQHHKTTTATLAARDRAAVDAHAAPHRRLHQGEELDSIEGFTEQRQAPKLMPPTRELLASXXXXXXXXXXXXXNTGFYGDXXXXXKKAAGPG-----------------PSAGLEASASGGV----VESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWDTNSGGPAGSAATGKXXXXXXXXXXXXXXXXXXXMVPSSVGPVSXXXXXXXXXXXXXXXXXXXXASFSTAPESSSEP------EVAAGMTSLALSDGSRSGLNSSSQGTTAIEVSXXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQ 732
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13092.5845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR27_ECTSI7.020e-10744.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 114..141
e-value: 0.048
score: 22.8
coord: 12..39
e-value: 200.0
score: 0.8
coord: 83..110
e-value: 0.91
score: 17.4
coord: 42..69
e-value: 0.04
score: 23.1
coord: 142..169
e-value: 3.9
score: 13.0
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 5..209
NoneNo IPR availablePANTHERPTHR24107:SF15coord: 5..209
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 5..179
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..212
e-value: 6.0E-29
score: 102.6
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 116..135
e-value: 0.099
score: 12.7
coord: 45..61
e-value: 0.055
score: 13.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13092contigM-pyrifera_M_contig13092:2430..8296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13092.5845.1mRNA_M-pyrifera_M_contig13092.5845.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13092 2430..8296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13092.5845.1 ID=prot_M-pyrifera_M_contig13092.5845.1|Name=mRNA_M-pyrifera_M_contig13092.5845.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=747bp
AGLQLSNLLKASASLHTVQASGNYLGDRGLAALCGAFCYLNPARVLSLDV
SGNGIGDLGAQWLCKGISALCRNENRSADPGAGGGIRDLRLRGNNITHSG
AKDLAKLLSEDRCARQLRELDLSMNTITADGFRPLALSLRGCRELVRIDV
GGCRLGPGGVEAAAELIAAAGPKLTTVILTPKAEFADRVLGDRGGLAVAL
RQSLQRLADSLRFAGTVVEVSLGAFLRGDPSAAASIEETLRENRERAGVG
AGGERGGGGNGGGGEGGRRGDAGAGVASTPLSSRTTEKTRSGAPKRGTPS
SSSRTRGDTAGATPTASSSGGSRRTPPTHRAGSAAAAGSTPARSTPSGSK
DSTRHGVRGTGIERPKAGVERPKPGTVERTRRGGSARATPPPGPASAHRT
SSKSSLKEDGGRGGVTPGRSSAASSAHKRGAGSTTSLTTAATLAARDKAA
AEEEAAAAAAAAASANVAPTPRRRMHQGEELDSIDGFSPTVTARVPPPPP
ASSHGSSSSSRRPLPLSAVAGVSQTHASRNAAPSPGGPLADGYPAGGGGH
TAGPGAGMAATGSGAEGGRHLESIADVVSKVMGDTEAMVAQESPLCVAPS
TWQWQADTAAASAEAREGGGGGELYPQVIADEAAGVRPPSPRAALAASQS
LHPSDKPRLATSGAVAGAADGERSGRRERELADGMASLALADERRPRSGS
HETALEVSSGGSSGQQMVTIAEAGRILGPLVAQEVEKETKKIEIRMQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt