prot_M-pyrifera_M_contig13073.5840.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13073.5840.1
Unique Nameprot_M-pyrifera_M_contig13073.5840.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length114
Homology
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BLAST of mRNA_M-pyrifera_M_contig13073.5840.1 vs. uniprot
Match: D8LEX1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX1_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.260e-46
Identity = 83/115 (72.17%), Postives = 96/115 (83.48%), Query Frame = 0 
Query:    1 MSSPPKPASPWAVKLANEGKEQGVPVEKIRQKLVLEGLEPDLINVVLKGSGAGGDVGSEEH-VAPSSPSTSPQRQQLSARKFHDMLLVGLPPAVVRQKMAMEGCPPEEINTFFAS 114
            M+SP K A+PWAVKL ++GKEQGVP EKIRQKLVLEGLEPDLI+ V++     G + ++ H + PSSP TSPQR+QLSARKFHDML VGLPPAVVRQKMAM+GC PEEIN FFAS
Sbjct:    1 MASPGKAAAPWAVKLVHDGKEQGVPAEKIRQKLVLEGLEPDLIDGVVEA----GSLSAKLHTIEPSSPCTSPQRRQLSARKFHDMLSVGLPPAVVRQKMAMDGCQPEEINNFFAS 111
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13073.5840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEX1_ECTSI1.260e-4672.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13073contigM-pyrifera_M_contig13073:1665..4859 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13073.5840.1mRNA_M-pyrifera_M_contig13073.5840.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13073 1665..4859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13073.5840.1 ID=prot_M-pyrifera_M_contig13073.5840.1|Name=mRNA_M-pyrifera_M_contig13073.5840.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp
MSSPPKPASPWAVKLANEGKEQGVPVEKIRQKLVLEGLEPDLINVVLKGS
GAGGDVGSEEHVAPSSPSTSPQRQQLSARKFHDMLLVGLPPAVVRQKMAM
EGCPPEEINTFFAS
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