prot_M-pyrifera_M_contig13058.5828.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13058.5828.1
Unique Nameprot_M-pyrifera_M_contig13058.5828.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length107
Homology
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BLAST of mRNA_M-pyrifera_M_contig13058.5828.1 vs. uniprot
Match: A0A6H5K7N3_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7N3_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 4.910e-12
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0 
Query:   44 FSLKGQVIAAIVVTAVAGNILGARRFRKTMVDQVARNAQR-KAETERMAKAARDRASKARSTGAA 107
            F+  GQV+ AIVVTA AG+I GARRFRKTM D V+RNAQR KAE E  A+AARDRA+   + G A
Sbjct:   26 FAFTGQVLTAIVVTAAAGSIFGARRFRKTMTDTVSRNAQRRKAEAESAARAARDRAAARANAGGA 90
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13058.5828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K7N3_9PHAE4.910e-1264.62J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..66
NoneNo IPR availableTMHMMTMhelixcoord: 49..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13058contigM-pyrifera_M_contig13058:2057..6139 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13058.5828.1mRNA_M-pyrifera_M_contig13058.5828.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13058 1953..6139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13058.5828.1 ID=prot_M-pyrifera_M_contig13058.5828.1|Name=mRNA_M-pyrifera_M_contig13058.5828.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
MDVAAGGGGAGEEDYSKPKGTVVSAGAAAIAAEKEAGEKEGVTFSLKGQV
IAAIVVTAVAGNILGARRFRKTMVDQVARNAQRKAETERMAKAARDRASK
ARSTGAA
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