prot_M-pyrifera_M_contig13029.5823.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig13029.5823.1
Unique Nameprot_M-pyrifera_M_contig13029.5823.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length128
Homology
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 5.730e-48
Identity = 78/119 (65.55%), Postives = 102/119 (85.71%), Query Frame = 0
Query:    6 NPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNITGKPVPKRVESTIGIDIIEDWKPVESGPLEVNIWDFAGQAIYHASHQLFLTKGALFLLVVNLRA 124
            NP+ RPP T++ESG ++A+ WW+D++RFGE  SNKLKMVLVGL+ AGKTT+VR++TG+ VPKR + T+GI+I  DWKP +  PL+V++WDFAGQA Y++SHQLFLTKGALFLLVV+L A
Sbjct:  248 NPWSRPPSTVLESGFERALGWWEDVKRFGEGKSNKLKMVLVGLAGAGKTTIVRHMTGRSVPKRSDRTVGIEITTDWKPGDEVPLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHA 366          
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 8.970e-37
Identity = 74/129 (57.36%), Postives = 95/129 (73.64%), Query Frame = 0
Query:    1 LDVGDNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNITG-KPVPKRVESTIGIDIIEDWKPVESGPLEVNIWDFAGQAIYHASHQLFLTKGALFLLVVNLRALAVD 128
            + V  NP++RPP   +  G+  A  WW  I RFGE TS+KLKMVLVGL+EAGKTT+VR+ TG  P  KR   TIG+++ E WKP ++ PL V++WDF+GQ+ YHASHQ+FLT+GALFLLVV+L  L  D
Sbjct:  388 VSVNGNPWVRPPRAFLARGLVSAGRWWDGIARFGEGTSSKLKMVLVGLAEAGKTTIVRHFTGGDPADKR---TIGVELSE-WKPNKNLPLAVSLWDFSGQSDYHASHQIFLTEGALFLLVVDLFELGRD 512          
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 2.800e-26
Identity = 61/142 (42.96%), Postives = 91/142 (64.08%), Query Frame = 0
Query:    1 LDVGDNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNITG----KPVPKRVESTIGIDIIEDWKPVESGP----------LEVNIWDFAGQAIYHASHQLFLTKGALFLLVVNLRALAVD 128
            +  G+NP+  PP  +++ G+  A S+ KD+E FG  +SN+LK+VLVGL  AGKT++   + G    KP+P   E T+G++I  D + + SGP          L+V +WDFAGQ  Y+ +HQ+FLT GALF+LVV++ A + D
Sbjct:    8 VSTGNNPWTEPPADVLQVGLAYAASFLKDLEDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLAPSKPLPSAKERTVGVEI-RDIR-LGSGPANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSED 147          
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 7.580e-24
Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = 0
Query:    5 DNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNITG----KPVPKRVESTIGIDIIEDWK---PVESGP-----LEVNIWDFAGQAIYHASHQLFLTKGALFLLVVNLRALAVD 128
            +NP+  PP  ++E G+  A  + KD+  FG  +SN+LK+VLVGL  AGKT++   + G    KP+P   E T+G++I +      P   G      L+V +WDFAGQ  Y+ +HQ+FLT GALF+LVV++ A + D
Sbjct:  184 ENPWTEPPADVLELGMAYAARFLKDLNDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDIQLAPGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSED 319          
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.390e-23
Identity = 54/134 (40.30%), Postives = 83/134 (61.94%), Query Frame = 0
Query:    4 GDNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNITGK---PVPKRVESTIGIDIIEDWKPVESGP------------LEVNIWDFAGQAIYHASHQLFLTKGALFLLVVNL 122
            G+NP+  PP  +ME G+     + KD++ +G    N+LK+VLVGL EAGKT++   + G+     PK  E T+G++I    + ++ GP            L+V++WDFAGQ  Y+ +HQ+FLT GALF+LVV++
Sbjct:   64 GENPWKEPPAKVMEKGMAHTAVFLKDLDDYGRAWYNRLKVVLVGLGEAGKTSIATRLEGRLGSSCPKPEERTVGVEI----RDIKLGPGPTNEGIGPNDELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDM 193          
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 9.040e-23
Identity = 57/124 (45.97%), Postives = 77/124 (62.10%), Query Frame = 0
Query:    1 LDVGDNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNIT-GKPVPKRVESTIGIDI-IEDWKPVESGPLEVNIWDFAGQAIYHASHQLFLTKGALFLLVVNL 122
            +D+  NP+  PP  +++ G DQ +S+ + + + G +    LK+VLVG   AGKTTL R +  GK        T GID+ I+ W P    PLEV IWDFAG   YH++HQ+FLT GAL LLVV+L
Sbjct:  148 VDLKGNPWETPPWNVIQGGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPPRTRGIDVHIQPWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDL 271          
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 1.240e-22
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = 0
Query:    5 DNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNIT---GKPVPKRVESTIGIDIIEDWK----PVE--SGP---LEVNIWDFAGQAIYHASHQLFLTKGALFLLVVNL 122
            +NP+  PP  +M  G+  A  + +D++ +G   SN+LK+VLVGL EAGKT++   +    G   PK  E T+G++I  D K    P    SGP   L+V++WDFAGQ  Y+ +HQ+FLT GALF+LVV++
Sbjct:  320 NNPWKEPPAEVMNKGMAHAAVFLRDLDDYGRAWSNRLKVVLVGLGEAGKTSIATRLEDRLGSSCPKPEERTVGVEI-RDIKLGPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDM 448          
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: A0A3B8Y4X8_9CYAN (GTPase (Fragment) n=1 Tax=Cyanothece sp. UBA12306 TaxID=2055757 RepID=A0A3B8Y4X8_9CYAN)

HSP 1 Score: 94.7 bits (234), Expect = 1.500e-22
Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    1 LDVGDNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNITGKP--VPKRVESTIGIDIIEDWKPVESG--PLEVNIWDFAGQAIYHASHQLFLTK 112
            L++ +NP   PP  +   GID    +++  E  GE T  + K+++VG    GKTTL R I  +   +P+  E+T GIDI + + P+E    P  VNIWDF GQ IYHA+HQ FLTK
Sbjct:   10 LELMENPLENPPIEVANLGIDAIRDYFRQKEEEGENTIYEAKLIIVGEGGVGKTTLARKIIDQSCQLPQENETTKGIDIQQWYFPIEGQDKPFRVNIWDFGGQEIYHATHQFFLTK 125          
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: A0A1D2QW53_9ARCH (Roc domain-containing protein n=1 Tax=Candidatus Altiarchaeales archaeon WOR_SM1_86-2 TaxID=1849364 RepID=A0A1D2QW53_9ARCH)

HSP 1 Score: 100 bits (249), Expect = 4.000e-22
Identity = 49/119 (41.18%), Postives = 79/119 (66.39%), Query Frame = 0
Query:    3 VGDNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNITGKPVPKRVESTIGIDIIEDWKPVESGPLEVNIWDFAGQAIYHASHQLFLTKGALFLLVVN 121
            +G NP   PP  I++ G D  I ++K +E  GE+  N++K++LVG   AGKT+L++ + G+   +  + T GI+I  DW   ESG ++V+ WDF GQ I HA+HQ FL++ +L++LV++
Sbjct:   73 LGGNPLESPPVEIVKQGRDAVIEYFKSLEEAGEQPLNEVKVLLVGDGGAGKTSLMKQLLGEEFDRSEKQTHGINI-RDW---ESGDIKVHFWDFGGQEIMHATHQFFLSRRSLYILVLD 187          
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 7.850e-22
Identity = 54/141 (38.30%), Postives = 86/141 (60.99%), Query Frame = 0
Query:    1 LDVGDNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSEAGKTTLVRNIT---GKPVPKRVESTIGIDIIEDWKPVESGP------------LEVNIWDFAGQAIYHASHQLFLTKGALFLLVVNLRALA 126
            +D  +NP+  PP  +M+ G+  A  + +D++ +G   SN+LK+VLVGL  AGKT++   +    G   P   E T+G++I    + ++ GP            L+V++WDFAGQ  Y+ +HQ+FLT+GALF+LVV++ A A
Sbjct:   21 VDTDNNPWKEPPADVMKRGMAYAAVFLRDLDDYGRAWSNRLKVVLVGLGGAGKTSIATRLEDRLGGCCPNPEERTVGVEI----RNIKLGPGATSEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYA 157          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13029.5823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKS5_ECTSI5.730e-4865.55LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LK68_ECTSI8.970e-3757.36LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JSN1_9PHAE2.800e-2642.96Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ1_9PHAE7.580e-2441.91Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE1.390e-2340.30Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLG1_ECTSI9.040e-2345.97LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI1.240e-2243.85LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A3B8Y4X8_9CYAN1.500e-2243.10GTPase (Fragment) n=1 Tax=Cyanothece sp. UBA12306 ... [more]
A0A1D2QW53_9ARCH4.000e-2241.18Roc domain-containing protein n=1 Tax=Candidatus A... [more]
A0A6H5K9A9_9PHAE7.850e-2238.30Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 41..62
score: 33.9
coord: 82..104
score: 30.27
NoneNo IPR availableGENE3D1.10.10.2190coord: 15..43
e-value: 3.3E-26
score: 94.6
NoneNo IPR availablePFAMPF08477Roccoord: 42..122
e-value: 8.2E-17
score: 61.5
NoneNo IPR availableGENE3D3.40.50.300coord: 44..123
e-value: 3.3E-26
score: 94.6
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 39..122
NoneNo IPR availablePANTHERPTHR24073:SF269DNAJ HOMOLOG SUBFAMILY C MEMBER 27coord: 39..122
IPR020859Roc domainPROSITEPS51424ROCcoord: 34..128
score: 22.756
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 38..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13029contigM-pyrifera_M_contig13029:8627..9010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13029.5823.1mRNA_M-pyrifera_M_contig13029.5823.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig13029 8627..9010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig13029.5823.1 ID=prot_M-pyrifera_M_contig13029.5823.1|Name=mRNA_M-pyrifera_M_contig13029.5823.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp
LDVGDNPFLRPPPTIMESGIDQAISWWKDIERFGEETSNKLKMVLVGLSE
AGKTTLVRNITGKPVPKRVESTIGIDIIEDWKPVESGPLEVNIWDFAGQA
IYHASHQLFLTKGALFLLVVNLRALAVD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020859ROC_dom
IPR027417P-loop_NTPase