prot_M-pyrifera_M_contig12935.5790.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12935.5790.1
Unique Nameprot_M-pyrifera_M_contig12935.5790.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length121
Homology
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BLAST of mRNA_M-pyrifera_M_contig12935.5790.1 vs. uniprot
Match: D7G4H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H8_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 9.490e-42
Identity = 83/123 (67.48%), Postives = 91/123 (73.98%), Query Frame = 0 
Query:    1 MCFVNAAVTAGRRCPPELLLALCSRGKFLDNFLLGASLGGGFLRAACLQAVFAMVYRTKNLFSGGDGGGGGDAV--GCTRDDVMGVACDALDQGQEEQVRLSGLKLLLGVVAAGASPSTATAQ 121
            MCF N+AVT  RRCPPE L ALCSRG  L  FL GAS G G LRAACLQA+FA+VYRTKN+F GG   G G  V   CT D VM VACDAL + Q  +VR+SGLKLLLGVVAAGASPS A A+
Sbjct: 1434 MCFANSAVTVARRCPPESLPALCSRGNLLGTFLTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSRVDVSCTCDGVMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAK 1556
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BLAST of mRNA_M-pyrifera_M_contig12935.5790.1 vs. uniprot
Match: A0A6H5KIR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR6_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 1.300e-41
Identity = 81/123 (65.85%), Postives = 89/123 (72.36%), Query Frame = 0 
Query:    1 MCFVNAAVTAGRRCPPELLLALCSRGKFLDNFLLGASLGGGFLRAACLQAVFAMVYRTKNLFSGG--DGGGGGDAVGCTRDDVMGVACDALDQGQEEQVRLSGLKLLLGVVAAGASPSTATAQ 121
            MCF N+ VT  RRCPPE L ALCSRG  L   L GAS G G LRAACLQA+FA+VYRTKN+F GG   G G      CT DDVM VACDAL + Q  +VR+SGLKLLLGVVAAGASPS A A+
Sbjct: 1525 MCFANSVVTVARRCPPEFLPALCSRGNLLGTLLTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSRGGASCTCDDVMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAK 1647
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12935.5790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4H8_ECTSI9.490e-4267.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIR6_9PHAE1.300e-4165.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12935contigM-pyrifera_M_contig12935:2967..7882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12935.5790.1mRNA_M-pyrifera_M_contig12935.5790.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12935 2967..7909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12935.5790.1 ID=prot_M-pyrifera_M_contig12935.5790.1|Name=mRNA_M-pyrifera_M_contig12935.5790.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
MCFVNAAVTAGRRCPPELLLALCSRGKFLDNFLLGASLGGGFLRAACLQA
VFAMVYRTKNLFSGGDGGGGGDAVGCTRDDVMGVACDALDQGQEEQVRLS
GLKLLLGVVAAGASPSTATAQ
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