prot_M-pyrifera_M_contig12882.5772.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12882.5772.1
Unique Nameprot_M-pyrifera_M_contig12882.5772.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length171
Homology
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 2.650e-76
Identity = 122/165 (73.94%), Postives = 142/165 (86.06%), Query Frame = 0
Query:    7 ELYDHVCIDMNQVLHVALRKARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRRENIKRNAQYSMSSLHLSPGTEFMEKAASAMEYYAFQESQKPCYRGVTFYVSGASVPGEGELKCIDWIKHMCSDGTEESAVIVGGDADLVLQGLALPQ 171
            E +DHVCIDMNQ+LHVA+RKARDE+HA+RRIF        RC PR+SVVFAFDGSAPLAKL+VQRSRREN KRN++Y MS+LHLSPGT+FM+  ASAMEYYAFQE  +PCY+GV FY+SGA+VPGEGELKCIDW+KHM     +ESAVIVGGDADL+LQGLAL +
Sbjct:   44 ESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKP--DESAVIVGGDADLILQGLALSE 206          
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: A0A7S0E673_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E673_9CRYP)

HSP 1 Score: 152 bits (384), Expect = 8.350e-44
Identity = 75/164 (45.73%), Postives = 105/164 (64.02%), Query Frame = 0
Query:    7 ELYDHVCIDMNQVLHVALRKARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRRENIKRNAQYSMSSLHLSPGTEFMEKAASAMEYYA-FQESQKPCYRGVTFYVSGASVPGEGELKCIDWIKHMCSDGTEESAVIVGGDADLVLQGLAL 169
            E ++HV  DMN +LH A R+A+D  HA+ +++           P +SVV AFDG  PLAKL+ QR RR    ++++Y +S LH++PGT+FM     A EYYA  +      +R V FY+SG+ V GEGE+K IDWI ++     ++  +IVGGDADLVLQGLA+
Sbjct:    2 EEFEHVLFDMNGLLHTACRRAKDFEHAILKVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRSKSSKSSKYKLSGLHITPGTKFMHAMKQACEYYAALRLVASAKFRNVAFYISGSDVAGEGEIKIIDWIHNLLHSQNDDRLIIVGGDADLVLQGLAV 165          
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC)

HSP 1 Score: 145 bits (367), Expect = 1.840e-40
Identity = 73/155 (47.10%), Postives = 100/155 (64.52%), Query Frame = 0
Query:   16 MNQVLHVALRKARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRRENIKRNAQYSMSSLHLSPGTEFMEKAASAMEYYA-FQESQKPCYRGVTFYVSGASVPGEGELKCIDWIKHMCSDGTEESAVIVGGDADLVLQGLAL 169
            MN +LH A RKA+D  HA+ R++           P +SVV AFDG  PLAKL+ QR RR    + ++Y +S LH++PGT+FM+    A EYYA  +      ++ V FY+SGA V GEGE+K I+WI ++  +  +E  +IVGGDADLVLQGLA+
Sbjct:    1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAV 155          
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: I2CR78_NANGC (5'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC)

HSP 1 Score: 139 bits (350), Expect = 7.020e-36
Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 0
Query:    4 KQQELYDHVCIDMNQVLHVALRKARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRRENIKRNAQYSMSSLHLSPGTEFMEKAASAMEYYAFQ--ESQKPCYRGVTFYVSGASVPGEGELKCIDWIKHMC---SDGT--------------------EESAVIVGGDADLVLQGLALP 170
            +Q   +DHV ID+NQ+ H+A RKARDE+HA+RR+             ++SVV AFDG APLAK+I QR RR   +++A+  ++SLHLSPGT FM +AA A+  +     ES     R + +YVS +  PGEGE+K +DWI        DG                      ES V+VGGDADLVLQGLALP
Sbjct:   87 EQYAEFDHVLIDVNQLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRA-AEKDAKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALP 277          
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: A0A8J6C9K3_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9K3_DIALT)

HSP 1 Score: 137 bits (344), Expect = 3.260e-34
Identity = 80/170 (47.06%), Postives = 102/170 (60.00%), Query Frame = 0
Query:    9 YDHVCIDMNQVLHVALRKARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRRENIKRNAQYSMSSLHLSPGTEFMEKAASAMEYYAFQESQKPC-YRGVTFYVSGASVPGEGELKCIDWIKHM---CSDGTEE--SAVIVGGDADLVLQGL-ALPQ 171
            Y+HV +DMNQVLH A+RKA D  HA   +F        RC P QSVV AFDG AP AKL+ QR RR   +R     +SS+ ++PG+EFM     A  YYA +  Q    YR VTF++SG+ V GEGE+K IDW+        DG  +  S  ++G D DLVLQ + ALP+
Sbjct:   61 YEHVLVDMNQVLHHAVRKANDIEHAKVLVFMELNLQLQRCVPTQSVVLAFDGPAPRAKLLTQRRRRAK-RRTLSGKLSSMIITPGSEFMRDMHEACAYYACRRLQNDAPYRNVTFWLSGSQVAGEGEVKIIDWLNTQLPPAPDGKPDTRSVCVIGSDVDLVLQCISALPR 229          
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD)

HSP 1 Score: 130 bits (326), Expect = 6.440e-32
Identity = 71/174 (40.80%), Postives = 103/174 (59.20%), Query Frame = 0
Query:   10 DHVCIDMNQVLHVALRKARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRRENIKRNAQYSMSSLHL-----SPGTEFMEKAASAMEYYAFQESQKPC-YRGVTFYVSGASVPGEGELKCIDWIKHMCSD---GTE------ESAVIVGGDADLVLQGLA 168
            DHVC D+NQV+H+ALRK+ +E   + R+F        +C P++SV FAFDG  P+AKL+ QR RR N   + +  +++ H+     +PGTE M     A++Y+A    +    Y  V   +SG  VPGEGE+K  DW+    +    GT+      ES +++GGDAD+VLQGLA
Sbjct:   23 DHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFACSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLA 196          
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: M1US37_CYAM1 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US37_CYAM1)

HSP 1 Score: 127 bits (320), Expect = 4.690e-31
Identity = 74/172 (43.02%), Postives = 102/172 (59.30%), Query Frame = 0
Query:    7 ELYDHVCIDMNQVLHVALRKARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRR--------ENIKRNAQYSMSSLHLSPGTEFMEKAASAMEYYAFQ--ESQKPCYRGVTFYVSGASVPGEGELKCIDWIKHMCSDGTEESAVIVGGDADLVLQGLA 168
            E +DHV  D+NQ++H+A R AR+ +    R+F         C P++SV  AFDG APLAKL+ Q+ RR           KR  +  +  L LSPGTE M+    A+E+Y     +S++  Y+ V F VSG +VPGEGE+K ID+I H   D  + S V++G DADLV+ GLA
Sbjct:   28 EHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYI-HRYVD-PQHSVVVIGSDADLVVLGLA 197          
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: A0A7J7IHE6_9RHOD (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD)

HSP 1 Score: 127 bits (319), Expect = 6.430e-31
Identity = 70/172 (40.70%), Postives = 102/172 (59.30%), Query Frame = 0
Query:    7 ELYDHVCIDMNQVLHVALRKARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRR--------ENIKRNAQYSMSSLHLSPGTEFMEKAASAMEYYAFQ--ESQKPCYRGVTFYVSGASVPGEGELKCIDWIKHMCSDGTEESAVIVGGDADLVLQGLA 168
            E +DHV  D+NQ++H+A R A++ +    R++         C P++SV  AFDG APLAKL+ Q+ RR          ++   +  +  L LSPGTE M+    A+E+Y     +S++  YR + F VSG +VPGEGE+K ID+I H C +    S +++G DADLVL GLA
Sbjct:   28 ESFDHVLFDLNQLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKLEPKKRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYI-HRCVE-PHHSVIVIGSDADLVLLGLA 197          
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 6.490e-31
Identity = 76/182 (41.76%), Postives = 99/182 (54.40%), Query Frame = 0
Query:    7 ELYDHVCIDMNQVLHVALRKARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRRENIKRNAQY-------------------SMSSLHLSPGTEFMEKAASAMEYYAFQESQKPC-YRGVTFYVSGASVPGEGELKCIDWIKHMCSDGTEESAVIVGGDADLVLQGLA 168
            E YDHV  D+NQ+LH A+RKA +       IF         C PR+SV FAFDG APLAKL  QR RR   +  ++Y                   ++  L ++PG E +     ++EY+A+   Q    YR V   +SGA VPGEGELK ID+ +      T+ S V+VGGDAD+VLQGLA
Sbjct:   28 EYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIPSTD-SVVVVGGDADIVLQGLA 208          
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Match: A0A482S5Y4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5Y4_9ARCH)

HSP 1 Score: 120 bits (301), Expect = 2.220e-29
Identity = 64/165 (38.79%), Postives = 91/165 (55.15%), Query Frame = 0
Query:    9 YDHVCIDMNQVLHVALRK---ARDENHAMRRIFXXXXXXXXRCAPRQSVVFAFDGSAPLAKLIVQRSRRENIKRNAQYSMSSLHLSPGTEFMEKAASAMEYYAFQESQKPCYRGVTFYVSGASVPGEGELKCIDWI-KHMCSDGTEESAVIVGGDADLVLQGLAL 169
            YDH+C+DMNQ+LH A+RK   +  E    R +F           P +SVVFAFDG AP AK  +QRSRR            S  LSPGTEFM      +  Y  Q  ++P +  +T+Y+S A  PGEGE+K I WI +++    + +S  +   D+D+V+Q + +
Sbjct:   13 YDHICLDMNQILHYAIRKLGKSNSEKKMYRFMFRLLDEVFLLARPVKSVVFAFDGPAPFAKFNLQRSRRTR-------DTVSNQLSPGTEFMTSMEEVVSVYLLQRLRRPAFANLTYYISDAETPGEGEIKIIQWINRYLSMVNSNDSIALYSADSDMVVQAMCI 170          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12882.5772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZW9_9PHAE2.650e-7673.94XRN_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S0E673_9CRYP8.350e-4445.73Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
L1JQ07_GUITC1.840e-4047.10Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
I2CR78_NANGC7.020e-3644.795'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannoch... [more]
A0A8J6C9K3_DIALT3.260e-3447.06Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S1TFG2_9RHOD6.440e-3240.80Hypothetical protein n=4 Tax=Compsopogon caeruleus... [more]
M1US37_CYAM14.690e-3143.02XRN_N domain-containing protein n=1 Tax=Cyanidiosc... [more]
A0A7J7IHE6_9RHOD6.430e-3140.70XRN_N domain-containing protein n=1 Tax=Cyanidioco... [more]
A0A2V3J5K0_9FLOR6.490e-3141.765'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
A0A482S5Y4_9ARCH2.220e-2938.79Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004859Putative 5-3 exonucleasePFAMPF03159XRN_Ncoord: 81..169
e-value: 6.4E-18
score: 65.1
NoneNo IPR availableGENE3D3.40.50.12390coord: 2..91
e-value: 3.6E-7
score: 31.9
coord: 92..171
e-value: 3.3E-13
score: 51.7
IPR0164945'-3' exoribonuclease 1PANTHERPTHR12341:SF75'-3' EXORIBONUCLEASE 1coord: 5..169
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 5..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12882contigM-pyrifera_M_contig12882:1792..4610 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12882.5772.1mRNA_M-pyrifera_M_contig12882.5772.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12882 1792..4612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12882.5772.1 ID=prot_M-pyrifera_M_contig12882.5772.1|Name=mRNA_M-pyrifera_M_contig12882.5772.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp
AFPKQQELYDHVCIDMNQVLHVALRKARDENHAMRRIFRDVNHTLRRCAP
RQSVVFAFDGSAPLAKLIVQRSRRENIKRNAQYSMSSLHLSPGTEFMEKA
ASAMEYYAFQESQKPCYRGVTFYVSGASVPGEGELKCIDWIKHMCSDGTE
ESAVIVGGDADLVLQGLALPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004859Put_53exo
IPR0164945_3_exoribonuclease_1
IPR0270735_3_exoribonuclease