prot_M-pyrifera_M_contig128669.5759.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig128669.5759.1
Unique Nameprot_M-pyrifera_M_contig128669.5759.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128669.5759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 97..136
e-value: 4.6E-6
score: 36.2
coord: 52..91
e-value: 290.0
score: 1.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 103..136
e-value: 2.5E-5
score: 24.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 104..137
score: 15.621
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..137
e-value: 9.6E-26
score: 92.4
NoneNo IPR availablePANTHERPTHR45333FAMILY NOT NAMEDcoord: 27..137
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 123..137
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 17..137
score: 18.616
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128669contigM-pyrifera_M_contig128669:88..498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128669.5759.1mRNA_M-pyrifera_M_contig128669.5759.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig128669 88..498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig128669.5759.1 ID=prot_M-pyrifera_M_contig128669.5759.1|Name=mRNA_M-pyrifera_M_contig128669.5759.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
DGTSLIWRTGDGSLVAELTQRGRAGVLEFSPDGSCFAAPREGGGIGVWET
TTGRMLSELAVGWGKSTYASFSADGDRVAVGNSSGLVQSWSPAAGEKGLD
PGVLKGHSRLVYRGSFSADGTRVLTASYDGTVKVWNV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf