prot_M-pyrifera_M_contig128645.5753.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig128645.5753.1
Unique Name	prot_M-pyrifera_M_contig128645.5753.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	166

Homology

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: Q1YLF2_AURMS (Formate dehydrogenase, iron-sulfur subunit n=17 Tax=Alphaproteobacteria TaxID=28211 RepID=Q1YLF2_AURMS)

HSP 1 Score: 347 bits (890), Expect = 1.090e-120
Identity = 159/166 (95.78%), Postives = 161/166 (96.99%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGK GERSISVACMHCSDAPCMAVCPVDCFYQT+DGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEE+ S  EFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVS IY
Sbjct:    7 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKPGERSISVACMHCSDAPCMAVCPVDCFYQTSDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEEDNSAVEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSSIY 172

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: Q0G144_9HYPH (Formate dehydrogenase, iron-sulfur subunit, putative n=8 Tax=root TaxID=1 RepID=Q0G144_9HYPH)

HSP 1 Score: 344 bits (882), Expect = 1.630e-119
Identity = 156/166 (93.98%), Postives = 161/166 (96.99%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCDAERCIECNACVTACKNE+EVPWGVNRRRVVTINDGK GERSISVACMHCSDAPCMAVCPVDCFYQT DGVVLHSKDLCIGCGYCFYACPFGAPQYP+ASNFG+RGKMDKCTFCAGGPEE+MS  EFQKYGRNR+AEGKLPLCAEMCSTKALLAGDGDTVS IY
Sbjct:    4 LCDAERCIECNACVTACKNENEVPWGVNRRRVVTINDGKPGERSISVACMHCSDAPCMAVCPVDCFYQTADGVVLHSKDLCIGCGYCFYACPFGAPQYPEASNFGTRGKMDKCTFCAGGPEEDMSNIEFQKYGRNRIAEGKLPLCAEMCSTKALLAGDGDTVSQIY 169

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: A0A1Y5TF19_9PROT (Formate dehydrogenase iron-sulfur subunit n=13 Tax=Proteobacteria TaxID=1224 RepID=A0A1Y5TF19_9PROT)

HSP 1 Score: 341 bits (875), Expect = 2.110e-118
Identity = 155/166 (93.37%), Postives = 158/166 (95.18%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGK GERSISVACMHCSDAPCMAVCPVDCFY+T DGVVLHSKDLCIGCGYCFYACPFGAPQYPQA N+GSRGKMDKCTFCAGGPEE+ S  EFQKYGRNRLAEGKLPLCAEMCSTKALL GDGDTVS IY
Sbjct:    7 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKPGERSISVACMHCSDAPCMAVCPVDCFYETDDGVVLHSKDLCIGCGYCFYACPFGAPQYPQAGNYGSRGKMDKCTFCAGGPEEDNSAAEFQKYGRNRLAEGKLPLCAEMCSTKALLGGDGDTVSSIY 172

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: V4RBU2_9HYPH (Formate dehydrogenase-O, iron-sulfur subunit n=1 Tax=Lutibaculum baratangense AMV1 TaxID=631454 RepID=V4RBU2_9HYPH)

HSP 1 Score: 337 bits (865), Expect = 7.060e-117
Identity = 154/166 (92.77%), Postives = 158/166 (95.18%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCDAERCIECNACVTACKNEHEVPWG+NRRRVVTI DG+ GERSISVACMHCSDAPCMAVCPVDCFYQT  GVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPE   S+ EFQKYGRNRLAEGKLPLCAEMCSTKALLAGDG+TVSDIY
Sbjct:    7 LCDAERCIECNACVTACKNEHEVPWGINRRRVVTIGDGQPGERSISVACMHCSDAPCMAVCPVDCFYQTEQGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEIANSEAEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGNTVSDIY 172

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: A0A6A7KPS3_9PROT (4Fe-4S dicluster domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KPS3_9PROT)

HSP 1 Score: 337 bits (864), Expect = 1.040e-116
Identity = 151/166 (90.96%), Postives = 157/166 (94.58%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGK GERSISVACMHCSD PCMAVCPVDCFYQT DGVVLHSKDLCIGCGYCFYACPFGAPQYPQA N+GSRGKMDKCTFC GGPEE+ S +EFQKYGRNR+AEGKLPLCAEMCSTKALL GDGD +S+IY
Sbjct:    7 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKPGERSISVACMHCSDPPCMAVCPVDCFYQTDDGVVLHSKDLCIGCGYCFYACPFGAPQYPQAGNYGSRGKMDKCTFCNGGPEEDNSAEEFQKYGRNRIAEGKLPLCAEMCSTKALLGGDGDVISNIY 172

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: UPI00115ECFD7 (formate dehydrogenase FDH3 subunit beta n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115ECFD7)

HSP 1 Score: 337 bits (863), Expect = 1.240e-116
Identity = 151/166 (90.96%), Postives = 158/166 (95.18%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCD+ERCIECNACVTACKNEHEVPWGVNRRRVVTINDGK GERS+SVACMHCSDAPCMAVCPVDCFYQT DGVVLH+KDLCIGCGYCFYACPFGAPQYP+ SNFG RGKMDKCTFCAGGPEE+ +Q EF+KYGRNRLAEGKLPLCAEMCSTKALLAGDGD VS IY
Sbjct:    7 LCDSERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKPGERSLSVACMHCSDAPCMAVCPVDCFYQTADGVVLHNKDLCIGCGYCFYACPFGAPQYPKESNFGGRGKMDKCTFCAGGPEEDNTQAEFEKYGRNRLAEGKLPLCAEMCSTKALLAGDGDQVSSIY 172

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: A0A369TC76_9PROT (4Fe-4S dicluster domain-containing protein n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A369TC76_9PROT)

HSP 1 Score: 335 bits (860), Expect = 4.080e-116
Identity = 153/166 (92.17%), Postives = 157/166 (94.58%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGK GERSISVACMHCSDAPCMAVCPVDCFY T +GVVL SKDLCIGCGYCFYACPFGAPQYPQA NFGSRGKMDKCTFCAGGPEE+ S  E+QKYG NRLAEGKLPLCAEMCSTKALLAGDGDTV+DIY
Sbjct:    7 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKPGERSISVACMHCSDAPCMAVCPVDCFYDTAEGVVLWSKDLCIGCGYCFYACPFGAPQYPQAGNFGSRGKMDKCTFCAGGPEEDNSTVEYQKYGSNRLAEGKLPLCAEMCSTKALLAGDGDTVADIY 172

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: A0A564WF57_9PROT (Formate dehydrogenase iron-sulfur subunit n=2 Tax=root TaxID=1 RepID=A0A564WF57_9PROT)

HSP 1 Score: 335 bits (859), Expect = 6.010e-116
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCDAERCIECNACVTACKNEHEVPWG+NRRRVVT+NDGKAGERS+SVACMHCSDAPC+AVCPVDC YQT  GVVLHSKDLCIGCGYCFYACPFGAPQYPQA NFGSRGKMDKCTFCAGGPEE+ S+ EF+KYGRNRLAEGKLPLCAEMC+TKALLAGDGD VS IY
Sbjct:    7 LCDAERCIECNACVTACKNEHEVPWGINRRRVVTLNDGKAGERSLSVACMHCSDAPCIAVCPVDCIYQTEQGVVLHSKDLCIGCGYCFYACPFGAPQYPQAGNFGSRGKMDKCTFCAGGPEEDHSEVEFRKYGRNRLAEGKLPLCAEMCATKALLAGDGDVVSQIY 172

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: G5ZZK0_9PROT (Fe-S-cluster-containing hydrogenase subunit n=10 Tax=Bacteria TaxID=2 RepID=G5ZZK0_9PROT)

HSP 1 Score: 335 bits (858), Expect = 7.960e-116
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTI DG+ GERSISVACMHCSDAPC AVCPVDCFYQT  GVVLHSKDLCIGCGYCFYACPFGAPQYPQA N+GSRGKMDKCTFCAGGPE++MS+ EFQKYGRNRLAEGKLP+CAEMCSTKALLAGDGD VS+I+
Sbjct:    7 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTIQDGQPGERSISVACMHCSDAPCTAVCPVDCFYQTEQGVVLHSKDLCIGCGYCFYACPFGAPQYPQAGNYGSRGKMDKCTFCAGGPEDDMSESEFQKYGRNRLAEGKLPICAEMCSTKALLAGDGDQVSNIF 172

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BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Match: A0A848Z3W0_9PROT (4Fe-4S dicluster domain-containing protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A848Z3W0_9PROT)

HSP 1 Score: 334 bits (856), Expect = 1.720e-115
Identity = 151/166 (90.96%), Postives = 156/166 (93.98%), Query Frame = 0

Query:    1 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACMHCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCSTKALLAGDGDTVSDIY 166
            LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDG  GERSISVACMHCSD PCMAVCPVDCFY++ +GVVLHSKDLCIGCGYCFYACPFGAPQYPQA NFGSRGKMDKCTFCAGGPE++ S  EF KYGRNRLAEGKLPLCAEMCSTKALLAGDGD VSDIY
Sbjct:    7 LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGDPGERSISVACMHCSDPPCMAVCPVDCFYESDEGVVLHSKDLCIGCGYCFYACPFGAPQYPQAGNFGSRGKMDKCTFCAGGPEDDFSGAEFSKYGRNRLAEGKLPLCAEMCSTKALLAGDGDMVSDIY 172

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig128645.5753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Q1YLF2_AURMS	1.090e-120	95.78	Formate dehydrogenase, iron-sulfur subunit n=17 Ta...	[more]
Q0G144_9HYPH	1.630e-119	93.98	Formate dehydrogenase, iron-sulfur subunit, putati...	[more]
A0A1Y5TF19_9PROT	2.110e-118	93.37	Formate dehydrogenase iron-sulfur subunit n=13 Tax...	[more]
V4RBU2_9HYPH	7.060e-117	92.77	Formate dehydrogenase-O, iron-sulfur subunit n=1 T...	[more]
A0A6A7KPS3_9PROT	1.040e-116	90.96	4Fe-4S dicluster domain-containing protein n=1 Tax...	[more]
UPI00115ECFD7	1.240e-116	90.96	formate dehydrogenase FDH3 subunit beta n=1 Tax=Te...	[more]
A0A369TC76_9PROT	4.080e-116	92.17	4Fe-4S dicluster domain-containing protein n=6 Tax...	[more]
A0A564WF57_9PROT	6.010e-116	90.36	Formate dehydrogenase iron-sulfur subunit n=2 Tax=...	[more]
G5ZZK0_9PROT	7.960e-116	90.36	Fe-S-cluster-containing hydrogenase subunit n=10 T...	[more]
A0A848Z3W0_9PROT	1.720e-115	90.96	4Fe-4S dicluster domain-containing protein n=4 Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000813	7Fe ferredoxin	PRINTS	PR00354	7FE8SFRDOXIN	coord: 49..59 score: 28.41 coord: 76..93 score: 41.67 coord: 59..69 score: 59.66
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PFAM	PF13247	Fer4_11	coord: 46..158 e-value: 1.8E-10 score: 40.9
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 41..71 score: 6.887
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 72..101 score: 10.037
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 1..28 score: 7.517
None	No IPR available	GENE3D	3.30.70.20		coord: 35..166 e-value: 8.8E-31 score: 109.2
None	No IPR available	PANTHER	PTHR42859	FAMILY NOT NAMED	coord: 1..164
None	No IPR available	PANTHER	PTHR42859:SF4	ELECTRON TRANSPORT PROTEIN YGFS-RELATED	coord: 1..164
None	No IPR available	SUPERFAMILY	54862	4Fe-4S ferredoxins	coord: 2..160
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 81..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig128645	contig	M-pyrifera_M_contig128645:1..498 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig128645.5753.1	mRNA_M-pyrifera_M_contig128645.5753.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig128645 1..498 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig128645.5753.1 ID=prot_M-pyrifera_M_contig128645.5753.1|Name=mRNA_M-pyrifera_M_contig128645.5753.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp
LCDAERCIECNACVTACKNEHEVPWGVNRRRVVTINDGKAGERSISVACM
HCSDAPCMAVCPVDCFYQTTDGVVLHSKDLCIGCGYCFYACPFGAPQYPQ
ASNFGSRGKMDKCTFCAGGPEENMSQDEFQKYGRNRLAEGKLPLCAEMCS
TKALLAGDGDTVSDIY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000813	7Fe_ferredoxin
IPR017896	4Fe4S_Fe-S-bd
IPR017900	4Fe4S_Fe_S_CS