prot_M-pyrifera_M_contig12863.5747.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12863.5747.1
Unique Nameprot_M-pyrifera_M_contig12863.5747.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length1210
Homology
BLAST of mRNA_M-pyrifera_M_contig12863.5747.1 vs. uniprot
Match: A0A6H5KMM5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM5_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 1.890e-85
Identity = 450/1411 (31.89%), Postives = 580/1411 (41.11%), Query Frame = 0
Query:    1 DTSWLHENS------DPSGGGRARDRGG-RRRARRCTLSPSIGSKSFMSGVDFDDPENFPNIPQAVGVTTSV------------------GSVNVGI------------VAAEDGNAVLAISSTRKTLSPSPGSDLQDARLPDPSVVANLFDDVEETTPEPKLPPPLGVLGSLGNQNQACAVATERDRSGKK---GQDQSSVKSVKCTSR-------DAHISVGMKNRQP----GPDRPRVGAEGVATTAVVTPPVLTSXXXXXXXXXXATKMRLATNTTVAPGGNKREKKGPLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSRRRSILMPSEARSFVESDLGGGGVEVAPPKQNFPSGEPGVPPPTAAPXXXXXXXXXXXXXXXXXXXTTDRDGKPRQRSGRIGXXXXXXXXKTAAEEFPLTSINATSCLSRPLATQRGWRLGSEDTTKSLVRVYYAAGKGSQRARRAAARLFCLTGFCLLPVTPDDARVLCEAAGDSLEWGLEETEQPRLVSRPCVRETREQKRELVHRIK---PLFKLMENATQDEKREAEAGTGVLSRKAAPDGFCYVERETKKPVDPDVYKAMYTVHIQASRAARLREFALLRANVSSPPETAVTWSNSAFSLPE-AVTGSISGSGNQKSSAATNTPPLALPV-----EAAHSPEK--------------AAATASTAQPLAPETKRVEAARAL-------ETAKTRKDPDDAIASAVETHASTVETQEEEGRLLSAVPGTPGEGAAHSG----------------------------------------DGAGATVAXXXXXXXXXXXXXXXXXXXXXXSQAGVYGGDL------------------------AVRPSPPSSSL--------VEEPTVSP----------STIAPAPKNAS--PERAEAELLSDGDCGGGGSPT----------GDGQTQEDSFVGADG---------AQSATSPLVPSRDS-----SKTTPRVLTGGDGNRGKVGEVPLTPLSLSPLAFPARSEEVDREAPSGQVAGRTDTA---QMLALTQQSSDAMDGSNVRGMEAPSEAVLSPGEAAKEAEELAALEKRLWSGWDLLLAEYHAAAALVKSRRNRQGVAPV-ISMPANENPTVLGPFD----AAAPPVATPRGAMVATRSVSG-GREDAAASRVSAMSLPATGTMIETGGFPHGAGGSAXXXXXXXXXXXXXXXXXXXXLQSAGRTEFIGVLSPSSPLLPLLDLRLSEEE--EPFEYRALRGAVAGTRTS--------RTTTWSTRRRIPAQQLSAEKKDSALKRQQRNRGAMGSAGTEASVGESVAHEAGGSGXXXXXXXXXXXTTCRLCCRKESDRILRPCQHVACGTCVDKLRVQAEHLGEALSCPWDRQPVDEI 1203
            DTSW+ +++          GG  R RGG +RR RR TLSPSIG  ++MS VD +DP  +P++P + G                       G   V I            V +   ++  AIS      SPS  +   D  LPDP+ VA+LF+  EE T     P PLG L +      + + A ++   GK+   GQ  S+  +    SR       DA I +  +N  P     P  P   A   A TA  +P  +            +            PG  +  +K                  XXXXXXXXXXXXXX      RSI+MP EA+  ++SDLG    E   P  N P            PXXXXXXXXXXXXXXXXXXX       P Q S             + A+E PL+SIN  SCLSRPLA QRGW +G EDT K L R +Y A  GSQRARR AARLFCLTG+ L  V P+DARVLCEAAGDS+EWGLE  E PRLVS+P  RE++EQKR LV RIK   PLF LM+ A++DEK +AE+ TGV+SRKAAPDGFCY +RET +PV+P  YK  Y  H++  RA+R+REFA                     +  E AV G + G   + SS+   T      +     EAA    +              AAA+  T   LA   + +    A        +T   + D   A+ +  E  A    +  EE  +L+   GT  E +  +                                         DGAG   A                      +   V GG +                        AV P P S+ L        +E   + P              P   +AS  PE +   +L+     G  SPT          GD Q ++ + + A G          + A S   P R       S T       G G+  +V   P +P      + P   +    E+  G   G   TA       +    S A  G+    +       +SPG+  + AEE+AALE+RLW+  D  L EYH   ALV+SRRN    A    +    EN T L        AA PP A   G   A+R+ SG G E+ A     A  LPA    ++T                                 +A   E  G  +P SPLLPLL LRLSEEE  E FEY    G                +      RRR  A+  S+ K     K  +      G+    A+    +  EA G G            TC        D +++PCQH AC  CVDKLR Q E  G+ALSCPWDR+ VDEI
Sbjct:   20 DTSWIDDSAVVAVAYGGDSGGVTRGRGGGKRRTRRRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGGDXXXXXNHQKSRSPSSHDQEFGGGLAEVTILRPPPQRDTDAAVTSPGADSAAAIS---VPASPSGSTASPDTDLPDPTAVADLFE-AEEGTTLASRPSPLGTLNN-NETKPSSSSAPKKKSEGKQDPLGQASSAAVARGRRSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAAR--APTATRSPRTMDGEVVGAVEEQASGLSTAIAAAATRPGDGEETQK----------------RVXXXXXXXXXXXXXXXXXXXXRSIVMPCEAQPLMDSDLGEDHAEAETP--NMP------------PXXXXXXXXXXXXXXXXXXXXXXXXXXPSQGSTST--------TNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEAAGDSMEWGLEGDE-PRLVSQPVRRESKEQKRGLVLRIKVGDPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKVPYLRHVRDVRASRVREFAAAXXXXXXXXXXXXXXXXXXXACRETAVDGMMPGVEKRASSSVKGTAISVACISPTRAEAASKSRRNGEGLVADPATDAFAAASRVTVGELAAAKESLPPGAASWGVDNNGDTPSKKIDGGGAVVAIGEGEARDDVSGGEEADVLTITEGTTQEASPEAAAETPRTVTSGERLYVGVTAAVAKNAAAIETLVSSNEAAVVDGAGEEKAMAEALVRGEVQEVEDLEVWKDMTAPVVAGGGVETIRESAAGEVNLDSSPSSHGTPEAVVPHPLSARLREPHGDSGLETAAIHPPFSHGVPETHGVFVPEESSASRVPETSTPRVLA---THGVVSPTTTSSVNAGSSGDEQGRDGAPLAACGNRVDSISERVEEAVSAYSPRRGGQTPMISATANPTSRNGGGSSVRVLGPPSSPPGSGGASSPFVEQGQHEESLGGGTPGPGGTAWKASHFGVGSPFSAAAYGAGAPTVPPAGGVAVSPGQDDEGAEEIAALEERLWAVVDAALREYHDGVALVRSRRNHHAFATAGAASETEENSTALSCVPDAGAAATPPPAAQVGETAASRTSSGLGLEEEAY----ASGLPAKAAPVDT-----------------TPLTGDVDRTRAVAAPAAATVEHDGQPTPDSPLLPLLQLRLSEEEDDERFEYSLAWGGAGAXXXXXXXXXXXXKARGGKPRRRSLAKAFSSHKTRKEPKVHE------GAGARSAAQVAGIESEARGDGVGGGKTTRL---TCXXXXXNACDTVMKPCQHSACSVCVDKLRSQGEQSGQALSCPWDRRGVDEI 1351          
BLAST of mRNA_M-pyrifera_M_contig12863.5747.1 vs. uniprot
Match: D8LM31_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM31_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 1.620e-82
Identity = 398/1224 (32.52%), Postives = 514/1224 (41.99%), Query Frame = 0
Query:   28 RCTLSPSIGSKSFMSGVDFDDPENFPNIPQAVGVTTSVGSVNV------------------------------GIVAAEDGNAVLAISSTRKTLSPSPGSDLQDARLPDPSVVANLFDDVEETTPEPKLPPPLGVLGSLGNQNQACAVATERDRSGK---KGQDQSSVKSVKCTSR-------DAHISVGMKNRQPG-PDRPRVGAEGVATTAVVTPPVLTSXXXXXXXXXXATKMRLATNTTVAPGGNKREKKGPLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSRRRSILMPSEARSFVESDLGGGGVEVAPPKQNFPSGEPGVPPPTAAPXXXXXXXXXXXXXXXXXXXTTDRDGKPRQRSGRIGXXXXXXXXKTAAEEFPLTSINATSCLSRPLATQRGWRLGSEDTTKSLVRVYYAAGKGSQRARRAAARLFCLTGFCLLPVTPDDARVLCEAAGDSLEWGLEETEQPRLVSRPCVRETREQKRELVHRIKPLFKLMENATQDEKREAEAGTGVLSRKAAPDGFCYVERETKKPVDPDVYKAMYTVHIQASRAARLREFALLRANVSSPPETAVTWSNSAFSLPE-AVTGSISGSGNQKSSAATNTPPLALPVEAAHSPEKAAATASTAQPLAPETKRVEAARALETAKTRKDPDDAIASAVETH---ASTVETQEEEGRLLSAVPGTP-GEGAAHSGDGAGATVAXXXXXXXXXXXXXXXXXXXXXXSQAGVYGGDLAVRPSPPSSSLVEEPTVSPSTIAPAPKNASPERAEAELLSDGDCGGGGSPTGDGQTQEDSFVGADGAQSATSPLVPSRDSSKTTPRVLTGGDGNRGKVGEVPLTPLSLSPLAFPARSEEVDREAPSGQVAGRTDTAQMLALTQQSSDAMDGSNVRGMEAPSEAVLSPGEAAKEAEELAALEKRLWSGWDLLLAEYHAAAALVKSRRNRQGVAPVISMPANENPTVLGPFDAAAPPVATPRGAMVATRSVSGGREDAAASRVSAMSLPATGTMIETGGFPHGAGGSAXXXXXXXXXXXXXXXXXXXXLQSAGRTEFIGVLSPSSPLLPLLDLRLSEEE--EPFEYRALRGAVAGTRTSRTTTWSTRRRIPAQQLSAEKKDSALKRQQRNRGAMGSAGTEASVGESVAHEAGGSGXXXXXXXXXXXTTCRLCCRKESDRILRPCQHVACGTCVDKLRVQAEHLGEALSCPWDRQPVDEI 1203
            R TLSPSIG  ++MS VD +DP  +P++P +                                            V +   ++  AIS      SPS  +   D  LPDP+ VA+LF+  E TTP P+ P PLG L +      + + A ++   GK   +GQ  S+  +    SR       DA I +  +N  P  P +P               P              A+ +  A    V   G+  E +  +P XXXXXXXXXXXXXXXXXX               RSI+MP EA+  ++SDLG G  E                      XXXXXXXXXXXXXXXXXXX      KP + +             + A+E PL+SIN  SCLSRPLA QRGW +G EDT K L R +Y A  GSQRARR AARLFCLTG+ L  V P+DARVLCE AGDS+EWGLE  E PRLVS+P  RE++EQKR LV RIKPLF LM+ A++DEK +AE+ TGV+SRKAAPDGFCY +RET +PV+P  YK  Y  H++  RA+R+REFA  R                  + PE AV G + G     SS+   T   A+ V         A T+ T         R EAA     +K+R+D +  +A         AS V  +E      S +PG   G G  ++GD     +                             GG   V         VEE                      E   D            G  + D     DG    TSP     +++  TPR +T G+G  G VG            A    + E++   PS + A                  +DG+     EA +EA+   G   K+  E+                    AA++  S    +  A    +PA   P    P                         +D   +R  A++ PA  T ++T G P                                        +P SPLLPLL LRLSEEE  E FEY    GA A            +    A++ S  K  S+ K ++  +   G     A+       EA G G            TCRLCCR   D +++PCQH ACG CVDKLR QAE  G+ALSCPWDR+ VDEI
Sbjct:   54 RRTLSPSIGKHNYMSNVDLNDPMKYPSLPSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXELTILRPPPQRDTDAAVTSPGADSAAAIS---VPASPSGSTASPDTDLPDPTAVADLFEAEEGTTPAPR-PSPLGTLNN-NETKPSSSSAPKKKSEGKQEPRGQASSAAVARGRLSRRATFGGADARIRLEAENLAPVLPSKPPNPVPAAPAPTATRSPRAMDGEVVGAAEEQASGLSTAAAAPVTRPGDGEETQERVPXXXXXXXXXXXXXXXXXXX---------------RSIVMPCEAQPLMDSDLGDGHAEAXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXKPSRGNTST--------TNSPADELPLSSINVVSCLSRPLAAQRGWPVGDEDTRKRLFRAFYGAAPGSQRARRVAARLFCLTGYALSAVAPEDARVLCEVAGDSMEWGLEGDE-PRLVSQPVRRESKEQKRGLVLRIKPLFDLMDKASKDEKLKAESATGVVSRKAAPDGFCYEDRETGEPVEPGAYKGPYLRHVRDVRASRVREFAAARXXXXXXXXXXXXXX---XACPETAVDGMMPGVEKSASSSVKGT---AISV---------ACTSPT---------RAEAA-----SKSRRDGEGLVADPATDAFPAASGVTVEESPTEKESLLPGAALGGGVDNNGDTPSKKID----------------------------GGGAVV--------AVEE---------------------GEARDDAS----------GAEEADVLAMTDGITQETSP-----EAAAETPRTITPGEG--GGVGTT---------AAVATNAAEIETLVPSDEAA-----------------VVDGAGQE--EAMAEAL---GRTTKKVGEI--------------------AASMTSSGLGPKEDAYASGLPAKAAPAATTPLT-----------------------DDVGRTR--AVAAPAAAT-VDTDGQP----------------------------------------TPDSPLLPLLQLRLSEEEDDERFEYSLAWGAGAEAGXXXXXXXXXQAGGKARRRSLAKAFSSHKTRKEPKAHEGVGARPAAQAAGNESEARGDGVGGGKTTTL---TCRLCCRNACDTVMKPCQHSACGVCVDKLRGQAEQSGQALSCPWDRRGVDEI 1013          
BLAST of mRNA_M-pyrifera_M_contig12863.5747.1 vs. uniprot
Match: A0A835Z9P5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P5_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.210e-9
Identity = 59/169 (34.91%), Postives = 83/169 (49.11%), Query Frame = 0
Query:  403 KSLVRVYYAAGKGSQRARRAAARLFCLTGFCLLPVTPDDARVLCEAAGD--------SLEWGLEETEQ-------PRLVSRPCVRE--TREQKRELVHRIKPLFKLMENATQDEKREAEAGTGVLSRKAAPDGFCYVERETKKP---VDPDVYKAMYTVHIQASRAARL 551
            ++L R Y AA  G QRARR AAR++CL+G+ L  V   DA +LC A           +L+W  +           PRL + P      +  QKR LV R++P+ + ME +   E+   EA TG+   +A  DG  Y  R+  +    V P +Y   Y  H+ A RA RL
Sbjct:  326 RALCREYAAATPGGQRARRIAARVYCLSGYPLSAVAATDAELLCAARXXXXXXXXXAALDWPTDPRRDDPAAPPLPRLDALPAAMRGASNAQKRALVLRLRPVLERMEASGSVERAALEAATGLACERA--DGM-YRYRDGGRAGRIVAPALYAERYLQHLAAVRAERL 491          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12863.5747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KMM5_9PHAE1.890e-8531.89RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LM31_ECTSI1.620e-8232.52RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z9P5_9STRA5.210e-934.91RING-type domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1021..1041
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 1151..1202
e-value: 2.7E-6
score: 27.2
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1148..1205
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1130..1205
e-value: 6.4E-9
score: 37.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 1153..1197
score: 9.834

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12863contigM-pyrifera_M_contig12863:2266..8194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12863.5747.1mRNA_M-pyrifera_M_contig12863.5747.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12863 2266..8194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12863.5747.1 ID=prot_M-pyrifera_M_contig12863.5747.1|Name=mRNA_M-pyrifera_M_contig12863.5747.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1210bp
DTSWLHENSDPSGGGRARDRGGRRRARRCTLSPSIGSKSFMSGVDFDDPE
NFPNIPQAVGVTTSVGSVNVGIVAAEDGNAVLAISSTRKTLSPSPGSDLQ
DARLPDPSVVANLFDDVEETTPEPKLPPPLGVLGSLGNQNQACAVATERD
RSGKKGQDQSSVKSVKCTSRDAHISVGMKNRQPGPDRPRVGAEGVATTAV
VTPPVLTSASSSTPSSTTATKMRLATNTTVAPGGNKREKKGPLPSPPASA
SATAPEPEPAAAPLPIAVKQKKSRNSRRRSILMPSEARSFVESDLGGGGV
EVAPPKQNFPSGEPGVPPPTAAPATAPATAATAATATAAAAATTDRDGKP
RQRSGRIGGGGGGGGGKTAAEEFPLTSINATSCLSRPLATQRGWRLGSED
TTKSLVRVYYAAGKGSQRARRAAARLFCLTGFCLLPVTPDDARVLCEAAG
DSLEWGLEETEQPRLVSRPCVRETREQKRELVHRIKPLFKLMENATQDEK
REAEAGTGVLSRKAAPDGFCYVERETKKPVDPDVYKAMYTVHIQASRAAR
LREFALLRANVSSPPETAVTWSNSAFSLPEAVTGSISGSGNQKSSAATNT
PPLALPVEAAHSPEKAAATASTAQPLAPETKRVEAARALETAKTRKDPDD
AIASAVETHASTVETQEEEGRLLSAVPGTPGEGAAHSGDGAGATVAGKGI
AVGGVGAGGVRTPGEVTPSQAGVYGGDLAVRPSPPSSSLVEEPTVSPSTI
APAPKNASPERAEAELLSDGDCGGGGSPTGDGQTQEDSFVGADGAQSATS
PLVPSRDSSKTTPRVLTGGDGNRGKVGEVPLTPLSLSPLAFPARSEEVDR
EAPSGQVAGRTDTAQMLALTQQSSDAMDGSNVRGMEAPSEAVLSPGEAAK
EAEELAALEKRLWSGWDLLLAEYHAAAALVKSRRNRQGVAPVISMPANEN
PTVLGPFDAAAPPVATPRGAMVATRSVSGGREDAAASRVSAMSLPATGTM
IETGGFPHGAGGSASSSTPALRQQQQQQQQQQQQLQSAGRTEFIGVLSPS
SPLLPLLDLRLSEEEEPFEYRALRGAVAGTRTSRTTTWSTRRRIPAQQLS
AEKKDSALKRQQRNRGAMGSAGTEASVGESVAHEAGGSGAEEEEEEEEEG
TTCRLCCRKESDRILRPCQHVACGTCVDKLRVQAEHLGEALSCPWDRQPV
DEIDVCLNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING