prot_M-pyrifera_M_contig128548.5735.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig128548.5735.1
Unique Nameprot_M-pyrifera_M_contig128548.5735.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length134
Homology
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BLAST of mRNA_M-pyrifera_M_contig128548.5735.1 vs. uniprot
Match: A0A7S4HIY5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HIY5_9EUKA)

HSP 1 Score: 119 bits (297), Expect = 3.540e-32
Identity = 55/94 (58.51%), Postives = 75/94 (79.79%), Query Frame = 0 
Query:    6 VQLKAIDLDPSADLTPFQGAVNALRELSVQQTVGGKLSCIKQAATGVETLLKKLMDNFGADEFLPMFCFAMLHAGMPALYSECAFMEDFMEDDL 99
            ++LKAID+ PSA++ PFQ AVNA+R ++VQ+TV  KL C++ AA+ VE LLKK+MD FGADEFLPMF   M+ +  P L+SEC FM+DFM+++L
Sbjct:   18 IRLKAIDIAPSAEVAPFQNAVNAMRSMAVQKTVARKLECVRIAASRVEGLLKKMMDQFGADEFLPMFSLVMVQSEAPKLHSECCFMDDFMDENL 111
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BLAST of mRNA_M-pyrifera_M_contig128548.5735.1 vs. uniprot
Match: UPI001ABDD7B1 (VPS9 domain-containing protein 1 n=2 Tax=Bufo TaxID=8383 RepID=UPI001ABDD7B1)

HSP 1 Score: 52.4 bits (124), Expect = 3.320e-5
Identity = 32/99 (32.32%), Postives = 49/99 (49.49%), Query Frame = 0 
Query:   21 PFQGAVNALRELSVQQTVGGKLSCIKQAATGVETLLKKLMDN-----FGADEFLPMFCFAMLHAGMPALYSECAFMEDFMEDDLRFSVYGYMLAQLQVA 114
            P++ AV  L  L  Q+T   KL CI +    +    ++ +        GAD+ LP+  F +L + M  L SECA +E+F+++       GY L  LQ A
Sbjct:  541 PYRAAVEELEYLPHQRTPQRKLECIVRTLRVICECAEEYVSTPGTAAIGADDLLPILAFVVLKSRMSHLLSECAALEEFIQEGYLIGEEGYCLTSLQSA 639
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128548.5735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4HIY5_9EUKA3.540e-3258.51Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
UPI001ABDD7B13.320e-532.32VPS9 domain-containing protein 1 n=2 Tax=Bufo TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003123VPS9 domainPFAMPF02204VPS9coord: 24..116
e-value: 7.9E-17
score: 61.4
IPR003123VPS9 domainPROSITEPS51205VPS9coord: 1..127
score: 17.664
IPR037191VPS9 domain superfamilyGENE3D1.20.1050.80coord: 2..124
e-value: 3.8E-17
score: 64.3
IPR037191VPS9 domain superfamilySUPERFAMILY109993VPS9 domaincoord: 20..115
NoneNo IPR availablePANTHERPTHR23101RAB GDP/GTP EXCHANGE FACTORcoord: 59..115
NoneNo IPR availablePANTHERPTHR23101:SF98VPS9 DOMAIN-CONTAINING PROTEIN 1coord: 59..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128548contigM-pyrifera_M_contig128548:97..498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128548.5735.1mRNA_M-pyrifera_M_contig128548.5735.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig128548 97..498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig128548.5735.1 ID=prot_M-pyrifera_M_contig128548.5735.1|Name=mRNA_M-pyrifera_M_contig128548.5735.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
TPSDLVQLKAIDLDPSADLTPFQGAVNALRELSVQQTVGGKLSCIKQAAT
GVETLLKKLMDNFGADEFLPMFCFAMLHAGMPALYSECAFMEDFMEDDLR
FSVYGYMLAQLQVAAGVFTDPSTLAGLEAPRQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003123VPS9
IPR037191VPS9_dom_sf