prot_M-pyrifera_M_contig128526.5728.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig128526.5728.1
Unique Nameprot_M-pyrifera_M_contig128526.5728.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length84
Homology
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: A0A6H5JZ76_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ76_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 2.630e-46
Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0
Query:    1 CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ 84
            CS+SLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQ+ HHVFINLRTCRVYCLPDSYEVVDSSLEDI+RALDPRYSP  IAALD+
Sbjct:  105 CSISLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQNGHHVFINLRTCRVYCLPDSYEVVDSSLEDIKRALDPRYSPECIAALDK 188          
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: A0A835Z9Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 5.720e-38
Identity = 65/83 (78.31%), Postives = 76/83 (91.57%), Query Frame = 0
Query:    2 SVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ 84
            SV+LSN NVYACLVCGKYFQGRGR+THAYTHSVQHSHHVFI+L T ++YCLPD+YEVVDSSL+DI+RAL P Y+P  +AALD+
Sbjct:    9 SVTLSNQNVYACLVCGKYFQGRGRSTHAYTHSVQHSHHVFIHLETSKIYCLPDNYEVVDSSLDDIKRALFPSYAPRDMAALDR 91          
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: A0A2P4XIN4_9STRA (U4/U6.U5 tri-snRNP-associated protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIN4_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.320e-36
Identity = 60/84 (71.43%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    1 CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ 84
            CS+SLS+ NVYACLVCGKYF+GRGRNTHA+THSVQ SHHVFINL+T R+YCLPD+YEVVD++L+ +Q AL P +  A I  LDQ
Sbjct:   40 CSISLSDQNVYACLVCGKYFKGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEAAQIVQLDQ 123          
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: D0MZT9_PHYIT (U4/U6.U5 tri-snRNP-associated protein, putative n=7 Tax=Phytophthora TaxID=4783 RepID=D0MZT9_PHYIT)

HSP 1 Score: 134 bits (338), Expect = 1.440e-35
Identity = 62/84 (73.81%), Postives = 73/84 (86.90%), Query Frame = 0
Query:    1 CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ 84
            CS+SLS+ NVYACLVCGKYFQGRGRNTHA+THSVQ SHHVFINL+T R+YCLPD+YEVVD++L+ +Q AL PR+    IA LDQ
Sbjct:   49 CSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPRFEETQIAQLDQ 132          
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: A0A833TV06_PHYIN (Ubiquitin carboxyl-terminal hydrolase domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=A0A833TV06_PHYIN)

HSP 1 Score: 134 bits (338), Expect = 1.960e-35
Identity = 62/84 (73.81%), Postives = 73/84 (86.90%), Query Frame = 0
Query:    1 CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ 84
            CS+SLS+ NVYACLVCGKYFQGRGRNTHA+THSVQ SHHVFINL+T R+YCLPD+YEVVD++L+ +Q AL PR+    IA LDQ
Sbjct:   49 CSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPRFEETQIAQLDQ 132          
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: UPI000C71934E (U4/U6.U5 tri-snRNP-associated protein 2-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71934E)

HSP 1 Score: 134 bits (337), Expect = 2.020e-35
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    1 CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ 84
            CSVSLS  NVYACLVCGKYFQGRG NTHAYTHSV  SHHVF+NL T + YCLPD+YE++DSSL+DI+R L+P YS A IA LD+
Sbjct:   54 CSVSLSRINVYACLVCGKYFQGRGNNTHAYTHSVSESHHVFLNLNTLKFYCLPDNYEIIDSSLKDIKRVLNPTYSDAKIADLDK 137          
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: A0A813CGI0_9DINO (Usp39 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CGI0_9DINO)

HSP 1 Score: 127 bits (318), Expect = 3.330e-35
Identity = 58/83 (69.88%), Postives = 73/83 (87.95%), Query Frame = 0
Query:    1 CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALD 83
            CSV+LS +NVYACLVCGK+FQGRGR+T AYTH++Q SH+VF+NLR  R++CLPD+YEVVDSSL D+Q ALDP ++ A IAA+D
Sbjct:   59 CSVTLSRHNVYACLVCGKFFQGRGRHTPAYTHALQASHYVFMNLRDARIWCLPDNYEVVDSSLRDVQYALDPSFTDAEIAAID 141          
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: H3G8Y5_PHYRM (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=H3G8Y5_PHYRM)

HSP 1 Score: 132 bits (332), Expect = 8.360e-35
Identity = 61/84 (72.62%), Postives = 73/84 (86.90%), Query Frame = 0
Query:    1 CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ 84
            CSVSLS+ NVYACLVCGKYF+GRGRNTHA+THSVQ SHHVFINL+T R+YCLPD+YEVVD++L+ +Q AL P +  A +A LDQ
Sbjct:   40 CSVSLSDQNVYACLVCGKYFKGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPTFEAAQVARLDQ 123          
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: A0A0W8BD71_PHYNI (mRNA-splicing protein ubp10 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8BD71_PHYNI)

HSP 1 Score: 132 bits (332), Expect = 1.370e-34
Identity = 61/84 (72.62%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    1 CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ 84
            CS+SLS+ NVYACLVCGKYFQGRGRNTHA+THSVQ SHHVFINL+T R+YCLPD+YEVVD++L+ +Q AL P +    IA LDQ
Sbjct:   68 CSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQ 151          
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Match: A0A0N7L7Q4_PLAHL (U4 tri-snrnp-associated n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7Q4_PLAHL)

HSP 1 Score: 132 bits (331), Expect = 1.470e-34
Identity = 61/84 (72.62%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    1 CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVYCLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ 84
            CS+SLS+ NVYACLVCGKYFQGRG NTHA+THSVQ SHHVFINL+T R+YCLPD+YEVVD++L+ +Q AL P +  A IA LDQ
Sbjct:   39 CSISLSDQNVYACLVCGKYFQGRGHNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEAAEIAQLDQ 122          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128526.5728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ76_9PHAE2.630e-4691.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9Q1_9STRA5.720e-3878.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P4XIN4_9STRA2.320e-3671.43U4/U6.U5 tri-snRNP-associated protein n=2 Tax=Phyt... [more]
D0MZT9_PHYIT1.440e-3573.81U4/U6.U5 tri-snRNP-associated protein, putative n=... [more]
A0A833TV06_PHYIN1.960e-3573.81Ubiquitin carboxyl-terminal hydrolase domain-conta... [more]
UPI000C71934E2.020e-3573.81U4/U6.U5 tri-snRNP-associated protein 2-like n=1 T... [more]
A0A813CGI0_9DINO3.330e-3569.88Usp39 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
H3G8Y5_PHYRM8.360e-3572.62Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
A0A0W8BD71_PHYNI1.370e-3472.62mRNA-splicing protein ubp10 n=1 Tax=Phytophthora n... [more]
A0A0N7L7Q4_PLAHL1.470e-3472.62U4 tri-snrnp-associated n=1 Tax=Plasmopara halsted... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001607Zinc finger, UBP-typeSMARTSM00290Zf_UBP_1coord: 1..49
e-value: 1.1E-13
score: 61.5
IPR001607Zinc finger, UBP-typePFAMPF02148zf-UBPcoord: 1..62
e-value: 5.7E-16
score: 58.6
IPR001607Zinc finger, UBP-typePROSITEPS50271ZF_UBPcoord: 1..60
score: 18.311
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..70
e-value: 3.5E-30
score: 105.7
IPR033809USP39PANTHERPTHR21646:SF16U4/U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 2coord: 1..84
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 1..84
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128526contigM-pyrifera_M_contig128526:199..450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128526.5728.1mRNA_M-pyrifera_M_contig128526.5728.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig128526 199..450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig128526.5728.1 ID=prot_M-pyrifera_M_contig128526.5728.1|Name=mRNA_M-pyrifera_M_contig128526.5728.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp
CSVSLSNNNVYACLVCGKYFQGRGRNTHAYTHSVQHSHHVFINLRTCRVY
CLPDSYEVVDSSLEDIQRALDPRYSPAAIAALDQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001607Znf_UBP
IPR013083Znf_RING/FYVE/PHD
IPR033809USP39