prot_M-pyrifera_M_contig128117.5651.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig128117.5651.1
Unique Nameprot_M-pyrifera_M_contig128117.5651.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length118
Homology
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BLAST of mRNA_M-pyrifera_M_contig128117.5651.1 vs. uniprot
Match: A0A2E0YXQ8_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YXQ8_9GAMM)

HSP 1 Score: 85.9 bits (211), Expect = 4.080e-19
Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = 0 
Query:    4 EVFDILVISYAVVHLHLQYRYWIRKDTNVFAKYCGQGR---SYEYVSKWVYFTKATWMIVLVPLQYLGLAFRPALVYSFLMYAIELQLLFPSGNIYNMLNLLLAVGAVIED 111
             ++ + ++ Y V+HL  ++ +W+  D  +FAKY  QG    ++  ++K VYFTKATWMI+LV L  L + FR AL  SFL+YA+EL LLFP  NIYN LNLLLA G  +++
Sbjct:   16 SLYGLFLLCYTVIHLKFEWNFWMLDDFAIFAKYA-QGDDPLTHLAIAKKVYFTKATWMILLVWLCALRVPFRRALAASFLVYAVELLLLFPF-NIYNGLNLLLAGGFALQE 124
[Close]
BLAST of mRNA_M-pyrifera_M_contig128117.5651.1 vs. uniprot
Match: A0A2E0QS49_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E0QS49_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 1.190e-16
Identity = 40/102 (39.22%), Postives = 63/102 (61.76%), Query Frame = 0 
Query:    7 DILVISYAVVHLHLQYRYWIRKDTNVFAKYCGQGRSYEYVSKWVYFTKATWMIVLVPLQYLGLAFRPALVYSFLMYAIELQLLFPSGNIYNMLNLLLAVGAV 108
            + ++I   +VHLHL+YR W++K+T++F KY G+      V+KW Y+ KA W++ L+ L Y  + FR ALVYSF  YA+ + L     N Y +  L+ A+  +
Sbjct:    3 EAIIIVILLVHLHLEYRIWVKKETDIFKKYRGENDDPMKVAKWAYYAKALWLVALILLLYFEVEFRDALVYSFFGYAVVVTLSL-GRNAYTIHQLIFALACL 103
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128117.5651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2E0YXQ8_9GAMM4.080e-1947.75Uncharacterized protein n=1 Tax=Halioglobus sp. Ta... [more]
A0A2E0QS49_9BACT1.190e-1639.22Uncharacterized protein n=1 Tax=Verrucomicrobiales... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..117
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128117contigM-pyrifera_M_contig128117:96..449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128117.5651.1mRNA_M-pyrifera_M_contig128117.5651.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig128117 96..449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig128117.5651.1 ID=prot_M-pyrifera_M_contig128117.5651.1|Name=mRNA_M-pyrifera_M_contig128117.5651.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
MQVEVFDILVISYAVVHLHLQYRYWIRKDTNVFAKYCGQGRSYEYVSKWV
YFTKATWMIVLVPLQYLGLAFRPALVYSFLMYAIELQLLFPSGNIYNMLN
LLLAVGAVIEDCVPRFA*
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