prot_M-pyrifera_M_contig127370.5513.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig127370.5513.1
Unique Name	prot_M-pyrifera_M_contig127370.5513.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	125

Homology

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BLAST of mRNA_M-pyrifera_M_contig127370.5513.1 vs. uniprot
Match: A0A2E7K7R4_9PLAN (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K7R4_9PLAN)

HSP 1 Score: 252 bits (643), Expect = 5.510e-83
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0

Query:    1 MPMRDGSCLKVRSRIRKRLYFIKGDFSSGMGQIASLLIGRFPILQRIRFSFLFRGWHYRRCRCCGIKSDTEIQTDFLVSSTKAEAAMEANPLLEILMQLRFTAGLSEEDQHKLAAIAQKRKFRAG 125
            MPMRDGSCLKVRSRIRKRLYFIKGDFSSGMGQIASLLIGRFPILQRIRFSFLFRGWHYRRCRCCGIKSDTEIQTDFLVSSTKAEAAMEANPLLEILMQLRFTAGLSEEDQHKLAAIAQKRKFRAG
Sbjct:    1 MPMRDGSCLKVRSRIRKRLYFIKGDFSSGMGQIASLLIGRFPILQRIRFSFLFRGWHYRRCRCCGIKSDTEIQTDFLVSSTKAEAAMEANPLLEILMQLRFTAGLSEEDQHKLAAIAQKRKFRAG 125

[Close]

BLAST of mRNA_M-pyrifera_M_contig127370.5513.1 vs. uniprot
Match: A0A517WG46_9PLAN (cAMP receptor protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517WG46_9PLAN)

HSP 1 Score: 67.8 bits (164), Expect = 1.140e-11
Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 0

Query:   87 MEANPLLEILMQLRFTAGLSEEDQHKLAAIAQKRKFRAG 125
            MEANPLLEILM+LRFTAGLS  DQHKLAAIA++RKFRAG
Sbjct:    1 MEANPLLEILMKLRFTAGLSVADQHKLAAIARQRKFRAG 39

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BLAST of mRNA_M-pyrifera_M_contig127370.5513.1 vs. uniprot
Match: A0A518A9L0_9PLAN (Transcriptional activator FtrB n=6 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A9L0_9PLAN)

HSP 1 Score: 54.3 bits (129), Expect = 1.540e-6
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0

Query:   87 MEANPLLEILMQLRFTAGLSEEDQHKLAAIAQKRKFRAG 125
            MEAN L EILM+LRFTAGLSE DQ KLAAI++ ++F AG
Sbjct:    1 MEANQLQEILMELRFTAGLSEGDQQKLAAISRLKEFPAG 39

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig127370.5513.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig127370.5513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A2E7K7R4_9PLAN	5.510e-83	100.00	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A517WG46_9PLAN	1.140e-11	87.18	cAMP receptor protein n=5 Tax=Gimesia TaxID=164945...	[more]
A0A518A9L0_9PLAN	1.540e-6	71.79	Transcriptional activator FtrB n=6 Tax=Gimesia pan...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 44..125
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..43
None	No IPR available	TMHMM	TMhelix		coord: 21..43

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig127370	contig	M-pyrifera_M_contig127370:1..375 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig127370.5513.1	mRNA_M-pyrifera_M_contig127370.5513.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig127370 1..375 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig127370.5513.1 ID=prot_M-pyrifera_M_contig127370.5513.1|Name=mRNA_M-pyrifera_M_contig127370.5513.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MPMRDGSCLKVRSRIRKRLYFIKGDFSSGMGQIASLLIGRFPILQRIRFS
FLFRGWHYRRCRCCGIKSDTEIQTDFLVSSTKAEAAMEANPLLEILMQLR
FTAGLSEEDQHKLAAIAQKRKFRAG